X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Ffeatures%2Fstructurechooser.html;h=1bf9f323fc90685646cb2b153acbfe55a7be095c;hb=ab28bc91ab1cb7c4ef677dfebd66cd6beadf2f18;hp=7dd69c1feada0d9de530c61055a6de7f5481c186;hpb=d709b26b0decca4a43788c225fef897818826ef9;p=jalview.git diff --git a/help/html/features/structurechooser.html b/help/html/features/structurechooser.html index 7dd69c1..1bf9f32 100644 --- a/help/html/features/structurechooser.html +++ b/help/html/features/structurechooser.html @@ -55,22 +55,22 @@ Associating PDB files with Sequences
- Discovery/Association of PDB entries to a sequence happens + Discovery/Association of PDB entries to a sequence now happens automatically during the initialisation of the Structure Chooser - Interface. Jalview uses the sequence's ID to query the PDB Rest API, + Interface. Jalview uses the sequence's ID to query the PDB Rest API provided by the EBI to discover PDB Ids associated with the sequence.

Configuring displayed meta-data for Structures
- To configure the visible meta-data displayed for the discovered structures, click the 'Configure Displayed Columns' tab, then tick the options which you intend to make visible. + To configure the visible meta-data displayed for the discovered structures, click the 'Configure Displayed Columns' tab, then tick the options which you intend to make visible.

Auto-selection of best Structures
Jalview can automatically filter and select the best structures using various metric categories avaialble from the meta-data of the structures. To perform this simply select any of the following options from the drop-down menu in the Structure Chooser interface: Best Uniprot coverage, Higest Resolution, - - Best Quality, Highest Protein Chain etc. When the 'Invert' option is selected, Jalview returns an inverse result for the current selected option in the drop-down menu.

+ Best Quality, Highest Protein Chain etc. When the 'Invert' option is selected, Jalview returns an inverse result for the current selected option in the drop-down menu.

+