X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Ffeatures%2Fviewingpdbs.html;h=412a23ae0283b8165f9a1d150835c958db7c3b74;hb=a8f483d04205bb8273ee311c12968b7e86d205fa;hp=fc12b3bdbbd6b43c4fe346d1e707c418bab4798e;hpb=a45774ee31d9f35d4eff46d54d7deab719afb092;p=jalview.git diff --git a/help/html/features/viewingpdbs.html b/help/html/features/viewingpdbs.html index fc12b3b..412a23a 100755 --- a/help/html/features/viewingpdbs.html +++ b/help/html/features/viewingpdbs.html @@ -1,20 +1,21 @@
Viewing PDB Structures
Jalview can view protein structures associated with a sequence -via the "Structure→View PDB entry:" entries from a -sequence's pop-up menu. Once a pdb +via the "Structure→" submenu from a +sequence's pop-up menu.
+The following menu entries are provided for viewing structure data
+
If a single pdb structure is selected, one of the following will happen:
- Opening structures associated with the current selection
- If one or more of the sequences in the alignment are selected, then
- the Structure submenu of the Sequence
- ID popup menu will contain will include either a 'View all X
- structures' entry in the submenu or a 'View structure for Sequence'
- entry. Both these options will open a new Jmol view containing one, or
- all the structures available for all selected sequences, superimposed
- using the currently selected region of the alignment. (This
- capability was added in Jalview 2.7)
-
Associating PDB files with Sequences
To associate PDB files with a sequence, right click on a sequence ID and select "Structure→ Associate Structure with