X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Fio%2Fexport.html;h=8a554aa17aacfdc9b922a98ce385df82a63811d1;hb=5b0d4841f42582d761e1a3ec853efbb8be346441;hp=c3270c7f4ec398f4cc136671ad82e07655d86212;hpb=82bb69383ab22735cbd3440c670ae0b290fe6afd;p=jalview.git

diff --git a/help/html/io/export.html b/help/html/io/export.html
index c3270c7..8a554aa 100755
--- a/help/html/io/export.html
+++ b/help/html/io/export.html
@@ -31,24 +31,21 @@
     The alignment view can be printed using <strong>File&#8594;Print</strong>,
     or exported in a number of ways via the <strong>File&#8594;Export</strong>
     menu:
-  
   <ul>
-    <li>HTML<br>
-    <em>for viewing in a web browser</em>
+    <li>HTML<br> <em>for viewing in a web browser</em>
     </li>
-    <li>PNG - a Portable Networks Graphics image<br>
-    <em>For low quality diagrams and powerpoint presentations</em>
+    <li>PNG - a Portable Networks Graphics image<br> <em>For
+        low quality diagrams and powerpoint presentations</em>
     </li>
-    <li>EPS - an Encapsulated Postscript Document<br>
-    <em>For high quality diagrams and publications.</em>
-    <li>SVG - a Scalable Vector Graphics document<br>
-    <em>For high quality diagrams in publications and on the web.</em>
+    <li>EPS - an Encapsulated Postscript Document<br> <em>For
+        high quality diagrams and publications.</em>
+    <li>SVG - a Scalable Vector Graphics document<br> <em>For
+        high quality diagrams in publications and on the web.</em>
     </li>
     <li>BioJS MSA - A JavaScript based multiple sequence alignment
       viewer. <br> <em>For interactive alignment data
         visualisation in a web browser.<br />Get more info about the
-        BioJS MSA viewer at a
-        href="http://msa.biojs.net/">http://msa.biojs.net/</a>
+        BioJS MSA viewer at <a href="http://msa.biojs.net/">http://msa.biojs.net/</a>
     </em>
     </li>
 
@@ -56,51 +53,37 @@
   <a name="htmlexport" />
   <p>
     <strong>Exporting alignments as Web Pages</strong>
-  
   <p>
     In Jalview 2.9, new HTML exporting options were introduced. The
     standard HTML export option displays alignments as SVG documents
-    embedded as scollable panes. Exported pages can optionally also
+    embedded as scrollable panes. Exported pages can optionally also
     include <a href="../features/bioJsonFormat.html">BioJSON</a> data,
     which allows Jalview to extract the original data used to create the
     page. Jalview can also generate HTML pages which embed BioJSON data
     and the BioJS MSA viewer, a pure javascript alignment viewer that
-    provides a range of interactive analysis capabiltiies.
+    provides a range of interactive analysis capabilities.
   </p>
   <p>
-
   <p>
-    <em>Import of BioJSON data from HTML pages</em>
+    <strong>Tips for working with EPS Files</strong>
+  </p>
+  <li>The EPS file generated by Jalview contains vector graphics
+    which are directly editable in graphics applications such as Adobe
+    Illustrator.</li>
+  <li>EPS files can be produced as &quot;Text&quot; or
+    &quot;Lineart&quot;. Use &quot;Text&quot; if you want the final
+    document to be MUCH smaller in diskspace and be able to search, edit
+    and select text. Use &quot;Lineart&quot; if you want an exact image
+    of the alignment as displayed in Jalview. This is useful if a 3rd
+    Party EPS viewer does not have the same Font which the EPS file was
+    created with.</li>
+  <li>When importing an EPS file into a Microsoft office document,
+    a snapshot image of the file will be displayed which often looks
+    blurred. Right-click the image and choose &quot;Edit image.&quot; to
+    convert it to word drawing objects which give a truer WYSIWIG
+    representation.</li>
+  <li>Mac OSX users will find that eps files are automatically
+    converted into PDF files.</li>
   </p>
-  <p>When importing embedded data in an HTML document, Jalview
-    searches for a hidden input or div element named "seqData":
-  <pre>
-    <code>&lt;div name="seqData" id="seqData" style="display: none;"&gt;#valid BioJSON data#&lt;/div&gt;</code>
-  </pre>
-  <strong>OR</strong>
-  <pre>
-    <code>&lt;input type="hidden" id="seqData" name="seqData" value='#valid BioJSON data#'/&gt;</code>
-  </pre>
-  Jalview can also import JSON data directly if it conforms to the BioJSON specification.
-</p>
-<p><em>Tips for working with EPS Files</em></p>
-<li>The EPS file generated by Jalview contains vector graphics which are directly 
-  editable in graphics applications such as Adobe Illustrator.</li>
-<li>EPS files can be produced as &quot;Text&quot; or &quot;Lineart&quot;. Use 
-  &quot;Text&quot; if you want the final document to be MUCH smaller in diskspace 
-  and be able to search, edit and select text. Use &quot;Lineart&quot; if you 
-  want an exact image of the alignment as displayed in Jalview. This is useful 
-  if a 3rd Party EPS viewer does not have the same Font which the EPS file was 
-  created with.</li>
-<li>When importing an EPS file into a Microsoft office document, a snapshot image of the
-  file will be displayed which often looks blurred. Right-click the
-  image and choose &quot;Edit image.&quot; to convert it to word
-  drawing objects which give a truer WYSIWIG representation.
-  </li>
-  <li>
-  Mac OSX users will find that eps files are automatically converted into
-  PDF files. 
-  </li>
-</p>
 </body>
 </html>