X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Fmenus%2FalignmentMenu.html;h=a7cb733d856154ee6f042de9e3348951b309f245;hb=87fa9a883d14416ba0e7f778bad69de813048b9c;hp=f219269e348706f6eb422ca557a319fc42361ae0;hpb=d28f1c9c4aa8fc2fef7cf3b422a7584198c74a55;p=jalview.git

diff --git a/help/html/menus/alignmentMenu.html b/help/html/menus/alignmentMenu.html
index f219269..a7cb733 100755
--- a/help/html/menus/alignmentMenu.html
+++ b/help/html/menus/alignmentMenu.html
@@ -112,7 +112,7 @@
 				</li>
 				<li><strong>Load Associated Tree<br> </strong><em>Jalview
 						can <a href="../calculations/treeviewer.html">view trees</a>
-						stored in the Newick file format, and associate them with the
+						 stored in the Newick file format, and associate them with the
 						alignment. Note: the ids of the tree file and your alignment MUST
 						be the same.</em></li>
 				<li><strong>Load Features / Annotations<br> </strong><em>Load
@@ -285,6 +285,11 @@
 						conservation calculation, quality calculation and consensus values
 						as bar charts. </em>
 				</li>
+			  <li><strong>Show All Annotations</strong><em><br>
+			    Show all available annotations on the alignment. You can selectively hide these from the <a href="./popupMenu.html">Popup</a> 
+			    or <a href="../features/annotation.html">Annotation</a> menus. (Since Jalview 2.8.2)</em></li>
+			  <li><strong>Hide All Annotations</strong><em><br>
+			    Hide all annotations on the alignment. (Since Jalview 2.8.2)</em></li>
 				<li><strong>Autocalculated Annotation<br> </strong><em>Settings
 					for the display of autocalculated annotation.</em>
 					<ul>
@@ -310,7 +315,7 @@
 				<li><strong>Show Sequence Features</strong><br> <em>Show
 						or hide sequence features on this alignment.</em>
 				</li>
-				<li><strong><a href="../features/featuresettings.html">Seqence
+				<li><strong><a href="../features/featuresettings.html">Sequence
 							Feature Settings...</a> </strong><em><br> <em>Opens the
 							Sequence Feature Settings dialog box to control the colour and
 							display of sequence features on the alignment, and configure and