X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Fmenus%2Falwcolour.html;h=4c295add197f524270915c0597e1c9b9318e3727;hb=ad15cff29620f960119f80176f1fd443da9f6763;hp=10ec9c76c71ada8a5abe7dbdade6d4326f240ff2;hpb=0696cffbccbb537be78d9fc2410589adbcd7be35;p=jalview.git diff --git a/help/html/menus/alwcolour.html b/help/html/menus/alwcolour.html index 10ec9c7..4c295ad 100755 --- a/help/html/menus/alwcolour.html +++ b/help/html/menus/alwcolour.html @@ -1,21 +1,24 @@ + * You should have received a copy of the GNU General Public License + * along with Jalview. If not, see . + * The Jalview Authors are detailed in the 'AUTHORS' file. + --> Alignment Window Menus @@ -31,7 +34,7 @@
  • Colour Scheme options: None, ClustalX, Blosum62 Score, Percentage Identity, Zappo, Taylor, Hydrophobicity, Helix Propensity, Strand Propensity, - Turn Propensity, Buried Index, Nucleotide, User Defined
    + Turn Propensity, Buried Index, Nucleotide, Purine/Pyrimidine, User Defined
     See colours for a description of all colour schemes.
    • @@ -56,6 +59,11 @@ Colours the alignment on a per-column value from a specified annotation. See Annotation Colouring.
    +
  • By RNA Helices
    + Colours the helices of an RNA alignment loaded from a Stockholm file. See + RNA Helices + Colouring.
    +