X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Fmenus%2Falwedit.html;h=67b3d2ee97ae48e8dae106955626867ac705c3b1;hb=797d8c6174d9909173824ada5cc543ce65836e84;hp=dd031eba5890f55b8db7aab5be633b8861ff956b;hpb=a8f483d04205bb8273ee311c12968b7e86d205fa;p=jalview.git diff --git a/help/html/menus/alwedit.html b/help/html/menus/alwedit.html index dd031eb..67b3d2e 100755 --- a/help/html/menus/alwedit.html +++ b/help/html/menus/alwedit.html @@ -7,16 +7,18 @@ * * Jalview is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License - * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. + * as published by the Free Software Foundation, either version 3 + * of the License, or (at your option) any later version. * * Jalview is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty * of MERCHANTABILITY or FITNESS FOR A PARTICULAR * PURPOSE. See the GNU General Public License for more details. * - * You should have received a copy of the GNU General Public License along with Jalview. If not, see . + * You should have received a copy of the GNU General Public License + * along with Jalview. If not, see . * The Jalview Authors are detailed in the 'AUTHORS' file. ---> + --> Alignment Window Menus @@ -89,8 +91,8 @@ undo the last redundancy deletion.
  • Pad Gaps
    When selected, the alignment will be kept at minimal width (so - there no empty columns before or after the first or last aligned - residue) and all sequences will be padded with gap characters to the + there are no empty columns before or after the first or last aligned + residue) and all sequences will be padded with gap characters before and after their terminating residues.
    This switch is useful when making a tree using unaligned sequences and when working with alignment analysis programs which require 'properly