X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Fmenus%2Falwedit.html;h=933a1bf5f30c6d4ff4653c62c58a1a086d57ddcc;hb=ab43013b7e357b84b4abade0dba949668dfb2a0e;hp=3fb874d2a4242ee00a7902353bbbd0f1700b6d81;hpb=96b6991703b70a1bbb0491f9946d397c9fcf5a38;p=jalview.git diff --git a/help/html/menus/alwedit.html b/help/html/menus/alwedit.html index 3fb874d..933a1bf 100755 --- a/help/html/menus/alwedit.html +++ b/help/html/menus/alwedit.html @@ -1,4 +1,24 @@ + Alignment Window Menus @@ -71,8 +91,8 @@ undo the last redundancy deletion.
  • Pad Gaps
    When selected, the alignment will be kept at minimal width (so - there no empty columns before or after the first or last aligned - residue) and all sequences will be padded with gap characters to the + there are no empty columns before or after the first or last aligned + residue) and all sequences will be padded with gap characters before and after their terminating residues.
    This switch is useful when making a tree using unaligned sequences and when working with alignment analysis programs which require 'properly