X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Fmenus%2Falwfile.html;h=bf1fed51ab979c0587f32bd9cadb7e7639806e42;hb=4fe43371b9524afd658c97c8767cf7e6dc84459e;hp=eb45924051412e0e0dd737410416b1c474ad1766;hpb=96b6991703b70a1bbb0491f9946d397c9fcf5a38;p=jalview.git
diff --git a/help/html/menus/alwfile.html b/help/html/menus/alwfile.html
index eb45924..bf1fed5 100755
--- a/help/html/menus/alwfile.html
+++ b/help/html/menus/alwfile.html
@@ -15,9 +15,10 @@
Add sequences to the visible alignment from file, URL, or cut &
paste window
Reload
- Reloads the alignment from the original file, if available.
Warning:
- This will delete any edits, analyses and colourings applied since the
- alignment was last saved, and cannot be undone.
+ Reloads the alignment from the original file, if available.
+ Warning: This will delete any edits, analyses and
+ colourings applied since the alignment was last saved, and cannot be
+ undone.
Save (Control S)
Saves the alignment to the file it was loaded from (if available), in
the same format, updating the original in place.
@@ -26,9 +27,11 @@
open, use the "Files of type:" selection box to determine
which alignment format to save as.
Output to Textbox
- The alignment will be displayed in plain text in a new window
+ The alignment will be displayed in plain text in a new window,
which you can "Copy and Paste" using the pull down menu, or
- your standard operating system copy and paste keys.
+ your standard operating system copy and paste keys. The output window
+ also has a "New Window" button to import the
+ (possibly edited) text as a new alignment.
Select the format of the text by selecting one of the following menu
items.
@@ -47,8 +50,8 @@
the number of residues per line of your alignment will depend on the
paper width or your alignment window width, whichever is the smaller.
Export Image
- Creates an alignment graphic with the current view's annotation, alignment
- background colours and group colours. If the alignment is wrapped, the output will also be
wrapped and will have the same visible residue width as the open
alignment.