X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Fmenus%2Falwselect.html;h=07828a3a26238e40ea706adb7e57d175f57a4fb5;hb=b9312fcb8dd554b3d25b52b6ff4c2ecb6e08d992;hp=578a53eaf057a37b2365cdf2b209b5acdbe5be03;hpb=354963d0c9d69f28fa5aa642c1f13627676ff4ae;p=jalview.git
diff --git a/help/html/menus/alwselect.html b/help/html/menus/alwselect.html
index 578a53e..07828a3 100644
--- a/help/html/menus/alwselect.html
+++ b/help/html/menus/alwselect.html
@@ -19,43 +19,60 @@
* along with Jalview. If not, see .
* The Jalview Authors are detailed in the 'AUTHORS' file.
-->
-
-Alignment Window Select Menu
-
-
- - Find... (Control F)
- Opens the Find dialog box to search for residues, sequence name or residue
- position within the alignment and create new sequence features from the queries.
+
+
+
+ Alignment Window Select Menu
+
+
+
+ - Find...
+ (Control F)
Opens the Find dialog box to
+ search for residues, sequence name or residue position within
+ the alignment and create new sequence features from the queries.
- - Select All (Control A)
+ - Select All (Control A)
Selects all the sequences and residues in the alignment.
- Use <CTRL> and A (<APPLE> and A on a MacOSX) to select all.
- - Deselect All (Escape)
- Removes the current selection box (red dashed box) from the
- alignment window. All selected sequences, residues and marked columns
- will be deselected.
- Use <ESCAPE> to deselect all.
- - Invert Sequence Selection (Control I)
- Any sequence ids currently not selected will replace the
- current selection.
- - Invert Column Selection (Control Alt I)
- Any columns currently not selected will replace the current
- column selection.
- - Create Group (Control G)
- Create a group containing the currently selected sequences.
- - Remove Group (Shift Control G)
- Ungroup the currently selected sequence group. (Create/Remove group new in Jalview 2.8.1)
- - Make Groups for selection
The
- currently selected groups of the alignment will be subdivided
- according to the contents of the currently selected region.
Use
- this to subdivide an alignment based on the different combinations
- of residues at marked columns. (since Jalview 2.9)
-
- - Undefine Groups (Control U)
- The alignment will be reset with no defined groups.
- WARNING: This cannot be undone.
- - Select/Hide Columns by Annotation...
Select or hide columns of an alignment by filtering with properties of any annotation row added to that alignment
-
-
+ Use <CTRL> and A (<APPLE> and A on a MacOSX) to
+ select all.
+
+ Deselect All (Escape)
+ Removes the current selection box (red dashed box) from the
+ alignment window. All selected sequences, residues and marked
+ columns will be deselected.
Use
+ <ESCAPE> to deselect all.
+
+ Invert Sequence Selection (Control I)
+ Any sequence ids currently not selected will replace the
+ current selection.
+ Invert Column Selection (Control Alt I)
+ Any columns currently not selected will replace the current
+ column selection.
+ Create Group (Control G)
Create
+ a group containing the currently selected sequences.
+ Remove Group (Shift Control G)
Ungroup
+ the currently selected sequence group.
+ Make Groups for selection
The
+ currently selected groups of the alignment will be subdivided
+ according to the contents of the currently selected region.
Use
+ this to subdivide an alignment based on the different
+ combinations of residues at marked columns.
+
+ Undefine Groups (Control U)
+ The alignment will be reset with no defined groups.
+ WARNING: This cannot be undone.
+
+ Select/Hide
+ Columns by Annotation
Select or Hide columns
+ in the alignment according to secondary structure, labels and
+ values shown in alignment annotation rows.
+ Select Highlighted Columns
Selects
+ the columns currently highlighted as a result of a find, mouse
+ over, or selection event from a linked structure viewer or other
+ application. Modifiers will work on some platforms: ALT will add
+ all but the highlighted set to the column selection, and CTRL
+ (or META) will toggle the selection.
+