X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Fmenus%2Falwselect.html;h=07828a3a26238e40ea706adb7e57d175f57a4fb5;hb=refs%2Fheads%2Fbug%2FJAL-2991_exporttosvgwrapview;hp=e18e273bc6e63d17a8266460e4a4915b193850f3;hpb=6ab4ef1cc71ff9d28a21a139db69e4a8351a3fb5;p=jalview.git
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+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see .
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ -->
+
+
+
+ Alignment Window Select Menu
+
+
+
+ - Find...
+ (Control F)
Opens the Find dialog box to
+ search for residues, sequence name or residue position within
+ the alignment and create new sequence features from the queries.
+
+ - Select All (Control A)
+ Selects all the sequences and residues in the alignment.
+ Use <CTRL> and A (<APPLE> and A on a MacOSX) to
+ select all.
+
+ - Deselect All (Escape)
+ Removes the current selection box (red dashed box) from the
+ alignment window. All selected sequences, residues and marked
+ columns will be deselected.
Use
+ <ESCAPE> to deselect all.
+
+ - Invert Sequence Selection (Control I)
+ Any sequence ids currently not selected will replace the
+ current selection.
+ - Invert Column Selection (Control Alt I)
+ Any columns currently not selected will replace the current
+ column selection.
+ - Create Group (Control G)
Create
+ a group containing the currently selected sequences.
+ - Remove Group (Shift Control G)
Ungroup
+ the currently selected sequence group.
+ - Make Groups for selection
The
+ currently selected groups of the alignment will be subdivided
+ according to the contents of the currently selected region.
Use
+ this to subdivide an alignment based on the different
+ combinations of residues at marked columns.
+
+ - Undefine Groups (Control U)
+ The alignment will be reset with no defined groups.
+ WARNING: This cannot be undone.
+
+ - Select/Hide
+ Columns by Annotation
Select or Hide columns
+ in the alignment according to secondary structure, labels and
+ values shown in alignment annotation rows.
+ - Select Highlighted Columns
Selects
+ the columns currently highlighted as a result of a find, mouse
+ over, or selection event from a linked structure viewer or other
+ application. Modifiers will work on some platforms: ALT will add
+ all but the highlighted set to the column selection, and CTRL
+ (or META) will toggle the selection.
+
+
+