X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Fmenus%2Falwselect.html;h=a804a4cfc91fe00bb1b3c16b0ef60432ad83cf53;hb=25aaaa87042b3f507ad4348120df7dd073182759;hp=34438cd0c6036d532bb645e8bcb6ad3dd072b7ce;hpb=d587f1aa61946dc14f6f089cf1dc2a3116cfb773;p=jalview.git
diff --git a/help/html/menus/alwselect.html b/help/html/menus/alwselect.html
index 34438cd..a804a4c 100644
--- a/help/html/menus/alwselect.html
+++ b/help/html/menus/alwselect.html
@@ -1,29 +1,60 @@
-
-
-Alignment Window Select Menu
-
-
- - Find... (Control F)
- Opens the Find dialog box to search for residues, sequence name or residue
- position within the alignment and create new sequence features from the queries.
-
- - Select All (Control A)
- Selects all the sequences and residues in the alignment.
- Use <CTRL> and A (<APPLE> and A on a MacOSX) to select all.
- - Deselect All (Escape)
- Removes the current selection box (red dashed box) from the
- alignment window. All selected sequences, residues and marked columns
- will be deselected.
- Use <ESCAPE> to deselect all.
- - Invert Sequence Selection (Control I)
- Any sequence ids currently not selected will replace the
- current selection.
- - Invert Column Selection (Control Alt I)
- Any columns currently not selected will replace the current
- column selection.
- - Undefine Groups (Control U)
- The alignment will be reset with no defined groups.
- WARNING: This cannot be undone.
-
-
-
+
+
+
+Alignment Window Select Menu
+
+
+ - Find... (Control F)
+ Opens the Find dialog box to search for residues, sequence name or residue
+ position within the alignment and create new sequence features from the queries.
+
+ - Select All (Control A)
+ Selects all the sequences and residues in the alignment.
+ Use <CTRL> and A (<APPLE> and A on a MacOSX) to select all.
+ - Deselect All (Escape)
+ Removes the current selection box (red dashed box) from the
+ alignment window. All selected sequences, residues and marked columns
+ will be deselected.
+ Use <ESCAPE> to deselect all.
+ - Invert Sequence Selection (Control I)
+ Any sequence ids currently not selected will replace the
+ current selection.
+ - Invert Column Selection (Control Alt I)
+ Any columns currently not selected will replace the current
+ column selection.
+ - Create Group (Control G)
+ Create a group containing the currently selected sequences.
+ - Remove Group (Shift Control G)
+ Ungroup the currently selected sequence group. (Create/Remove group new in Jalview 2.8.1)
+ - Make Groups for selection
The
+ currently selected groups of the alignment will be subdivided
+ according to the contents of the currently selected region.
Use
+ this to subdivide an alignment based on the different combinations
+ of residues at marked columns. (since Jalview 2.9)
+
+ - Undefine Groups (Control U)
+ The alignment will be reset with no defined groups.
+ WARNING: This cannot be undone.
+
+
+
+