X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Fmenus%2Falwselect.html;h=a80f2395a81baac7cfe87e954c35e1bc8fbff96d;hb=85676619b9aa2a406bdbb2918a0f5146f912e6cf;hp=34438cd0c6036d532bb645e8bcb6ad3dd072b7ce;hpb=d587f1aa61946dc14f6f089cf1dc2a3116cfb773;p=jalview.git
diff --git a/help/html/menus/alwselect.html b/help/html/menus/alwselect.html
index 34438cd..a80f239 100644
--- a/help/html/menus/alwselect.html
+++ b/help/html/menus/alwselect.html
@@ -1,29 +1,72 @@
-
-
-Alignment Window Select Menu
-
-
- - Find... (Control F)
- Opens the Find dialog box to search for residues, sequence name or residue
- position within the alignment and create new sequence features from the queries.
-
- - Select All (Control A)
- Selects all the sequences and residues in the alignment.
- Use <CTRL> and A (<APPLE> and A on a MacOSX) to select all.
- - Deselect All (Escape)
- Removes the current selection box (red dashed box) from the
- alignment window. All selected sequences, residues and marked columns
- will be deselected.
- Use <ESCAPE> to deselect all.
- - Invert Sequence Selection (Control I)
- Any sequence ids currently not selected will replace the
- current selection.
- - Invert Column Selection (Control Alt I)
- Any columns currently not selected will replace the current
- column selection.
- - Undefine Groups (Control U)
- The alignment will be reset with no defined groups.
- WARNING: This cannot be undone.
-
-
-
+
+
+
+
+
+ Alignment Window Select Menu
+
+
+
+ - Find...
+ (Control F)
Opens the Find dialog box to
+ search for residues, sequence name or residue position within
+ the alignment and create new sequence features from the queries.
+
+ - Select All (Control A)
+ Selects all the sequences and residues in the alignment.
+ Use <CTRL> and A (<APPLE> and A on a MacOSX) to
+ select all.
+
+ - Deselect All (Escape)
+ Removes the current selection box (red dashed box) from the
+ alignment window. All selected sequences, residues and marked
+ columns will be deselected.
Use
+ <ESCAPE> to deselect all.
+
+ - Invert Sequence Selection (Control I)
+ Any sequence ids currently not selected will replace the
+ current selection.
+ - Invert Column Selection (Control Alt I)
+ Any columns currently not selected will replace the current
+ column selection.
+ - Create Group (Control G)
Create
+ a group containing the currently selected sequences.
+ - Remove Group (Shift Control G)
Ungroup
+ the currently selected sequence group.
+ - Make Groups for selection
The
+ currently selected groups of the alignment will be subdivided
+ according to the contents of the currently selected region.
Use
+ this to subdivide an alignment based on the different
+ combinations of residues at marked columns.
+
+ - Undefine Groups (Control U)
+ The alignment will be reset with no defined groups.
+ WARNING: This cannot be undone.
+
+ - Select/Hide Columns by Annotation
Select or
+ Hide columns in the alignment according to secondary structure,
+ labels and values shown in alignment annotation rows.
+
+
+