X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Fmenus%2Falwview.html;h=3d2d3beeb3ab0666dbc18b98762025e00c0b4abe;hb=8d0d8f010041eb2089bfe0bf7e5ad481ceae56d5;hp=b34e6928d8912d393608e4aa60f5431cf8c5b68c;hpb=1d5612858f8384e57ff461990d8bafb149898073;p=jalview.git diff --git a/help/html/menus/alwview.html b/help/html/menus/alwview.html index b34e692..3d2d3be 100755 --- a/help/html/menus/alwview.html +++ b/help/html/menus/alwview.html @@ -1,4 +1,24 @@ + Alignment Window Menus @@ -32,10 +52,15 @@ Enable or disable the display of the histogram above the consensus sequence.
  • - Show Consensus Profile
     + Show Consensus Logo
     Enable or disable the display of the sequence logo above the consensus sequence.
    • -
  • +
  • Normalise Consensus Logo
    +     When enabled, scales all logo stacks to the same height, + making it easier to compare symbol diversity in highly variable + regions.
    • + +
  • Group Conservation
     When ticked, display a conservation row for all groups (only available for protein alignments).