X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Fmenus%2FpopupMenu.html;h=63bb815520d0cef043b2b33c22315755c1411292;hb=b0c310ec55943ba114a00ee581f6430d8dc945c7;hp=24430f187b7c5ad2c4083b672e8a392e091ca35a;hpb=a8f483d04205bb8273ee311c12968b7e86d205fa;p=jalview.git
diff --git a/help/html/menus/popupMenu.html b/help/html/menus/popupMenu.html
index 24430f1..63bb815 100755
--- a/help/html/menus/popupMenu.html
+++ b/help/html/menus/popupMenu.html
@@ -7,16 +7,18 @@
*
* Jalview is free software: you can redistribute it and/or
* modify it under the terms of the GNU General Public License
- * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ * as published by the Free Software Foundation, either version 3
+ * of the License, or (at your option) any later version.
*
* Jalview is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty
* of MERCHANTABILITY or FITNESS FOR A PARTICULAR
* PURPOSE. See the GNU General Public License for more details.
*
- * You should have received a copy of the GNU General Public License along with Jalview. If not, see .
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see .
* The Jalview Authors are detailed in the 'AUTHORS' file.
--->
+ -->
Popup Menu
@@ -29,14 +31,24 @@ not be accessible when in 'Cursor Mode' (toggled with the F2 key).
- Selection
- - Sequence Details ...
+ - Sequence Details...
(Since Jalview 2.8)
Open an HTML report containing the annotation
- and database cross references normally shown in the sequence's
+ and database cross references normally shown in the sequence's
tooltip.
+ - Show Annotations...
+ Choose to show (unhide) either All or
+ a selected type of annotation for the selected sequences. (Since Jalview 2.8.2)
+ - Hide Annotations...
+ Choose to hide either All or
+ a selected type of annotation for the selected sequences. (Since Jalview 2.8.2)
+ - Add Reference Annotations
+ Add to the alignment window any annotations on the selected sequences
+ which have been read from reference sources or calculated (for example,
+ secondary structure derived from 3D structure). (Since Jalview 2.8.2)
- Edit
- Copy
- Copys the selected region. In the applet version, the copied sequences
+ Copies the selected region. In the applet version, the copied sequences
are not available to the system clipboard.
- Cut
Cuts the selected region from the alignment. In the applet
@@ -122,7 +134,7 @@ not be accessible when in 'Cursor Mode' (toggled with the F2 key).
window will be displayed asking for a new sequence name and sequence description
to be entered. Press OK to accept your edit. To save sequence descriptions,
you must save in Fasta, PIR or Jalview File format.
- -
+ - Add Reference Annotations
When enabled, copies any available alignment annotation for this sequence to the current view.
- Represent Group With (Sequence Id)
All sequences in the current selection group will be hidden, apart
from (Sequence Id). Any edits performed on the visible representative
@@ -184,9 +196,7 @@ not be accessible when in 'Cursor Mode' (toggled with the F2 key).
(The View representative structures option was introduced in
Jalview 2.8.1)
-
-
-
-
+
- Hide Sequences