X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Fmenus%2FpopupMenu.html;h=79e7ada6fbdf5a1c2592de70fc73f4d841369a44;hb=e5ff0544866ec954e311b7401f5c3989c0016a5e;hp=1eb23668e0325d9ce4fe764c9f76952d5ea4018e;hpb=c17661b22323a66090ea91e04751aa17461b17c5;p=jalview.git diff --git a/help/html/menus/popupMenu.html b/help/html/menus/popupMenu.html index 1eb2366..79e7ada 100755 --- a/help/html/menus/popupMenu.html +++ b/help/html/menus/popupMenu.html @@ -25,10 +25,13 @@

- Popup Menu
This menu is visible - when right clicking either within a selected region on the - alignment or on a selected sequence name. It may not be accessible - when in 'Cursor Mode' (toggled with the F2 key). + Popup Menu
This menu is visible when + right clicking either within a selected region on the alignment or + on a selected sequence name. It may not be accessible when in + 'Cursor Mode' (toggled with the F2 key).
Mac Users: pressing CTRL whilst clicking + the mouse/track pad is the same as a right-click. See your + system's settings to configure your track-pad's corners to + generate right-clicks.

Selection @@ -144,9 +147,8 @@ and sequence description to be entered. Press OK to accept your edit. To save sequence descriptions, you must save in Fasta, PIR or Jalview File format.
Add - Reference Annotations
- When enabled, copies any available alignment +
Add Reference Annotations
+ When enabled, copies any available alignment annotation for this sequence to the current view.

Set as Reference or Unmark as Reference
Sets or unsets the reference sequence for @@ -172,13 +174,11 @@

3D Structure Data... This menu is visible when you right-click on a sequence name. When this - option is clicked, Jalview will open a 'Structure Chooser' dialogue with options to select the - structure which will eventually be opened in a 3D interactive - view.
These entries will only be present if the - sequence has associated - PDB structures. + option is clicked, Jalview will open the 'Structure + Chooser' , which allows you to discover and view 3D structures + for the current selection. For more info, see viewing PDB structures.

VARNA 2D Structure
If the sequence or alignment has RNA structure, then VARNA