X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Fmenus%2FpopupMenu.html;h=f84922e6c3c07b70f855c5eb8900af4bf0e4a46a;hb=0943de76f6a7435894e72479671642c05f2f3687;hp=4f66696d1fd035dd0e155685915b843141e323e9;hpb=0696cffbccbb537be78d9fc2410589adbcd7be35;p=jalview.git
diff --git a/help/html/menus/popupMenu.html b/help/html/menus/popupMenu.html
index 4f66696..f84922e 100755
--- a/help/html/menus/popupMenu.html
+++ b/help/html/menus/popupMenu.html
@@ -1,145 +1,190 @@
+ * You should have received a copy of the GNU General Public License
+ * along with Jalview. If not, see .
+ * The Jalview Authors are detailed in the 'AUTHORS' file.
+ -->
Popup Menu
-Popup Menu
-This menu is visible when right clicking either within a
-selected region on the alignment or on a selected sequence name. It may
-not be accessible when in 'Cursor Mode' (toggled with the F2 key).
-
- - Selection
-
- - Edit
-
- - Copy
- Copys the selected region. In the applet version, the copied sequences
- are not available to the system clipboard.
- - Cut
- Cuts the selected region from the alignment. In the applet
- version, the copied sequences are not available to the system clipboard.
- - Edit Sequence
- Edit the selected sequence(s) directly. Spaces will be converted
- to the current gap character.
- - To Upper Case
- Changes the case of selected region to lower case.
-
- - To Lower Case
- Changes the case of selected region to upper case.
-
- - Toggle Case
- Switches the case of all residues within the selected region.
-
-
- - Output to Textbox
- The selection area will be output to a a text window in the
- selected alignment format.
- - Create Sequence Feature...
- Opens the dialog box for creating sequence features over the currently
- selected region on each selected sequence.
- - Group
- Group Operations
-
- - GroupThis is the first entry in the
- menu, and will display the currently selected group's
- name. Selecting it displays a window allowing the name and
- description for this group to be edited. Click OK to set the
- new name and decription, and cancel to leave the existing
- name and description unchanged.
- - Remove Group
- This will undefine the selected group.
-
- - Group Colour
- Sets the colour
- of the group.
- - Boxes
- If selected the background of a residue within the selected
- group will be coloured according to the assigned colour scheme.
-
- - Text
- If selected the selected group will display text.
- - Colour Text
- If selected the selected group will display text in a
- colour slightly darker than the background colour of that residue.
- - Border Colour
- Selecting this will display a "Colour Chooser"
- window. Select a colour than press OK to set the border colour of
- a group.
- - Show Unconserved
- When this is selected, all symbols in the group matching the consensus sequence at that column will be rendered as a '.', highlighting mutations in the group area.
-
-
-
-
-
- - Sequence Id
- This menu is only visible if you right-click on a sequence name.
-
-
-
- - Structure
- This menu is only visible if you right-click on a sequence name.
-
-