X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Fmisc%2FaminoAcids.html;h=14650eb5518f27900fcb720bf855cb5609ea734c;hb=b2f9a8d7bce642ff4011bc6d49e02bb0569fbb11;hp=d675dffcb71a56fb2b6c7fe25fbf5493f9459aca;hpb=9db8c5a39261109682ee4b9527ec948c48263c37;p=jalview.git diff --git a/help/html/misc/aminoAcids.html b/help/html/misc/aminoAcids.html index d675dff..14650eb 100755 --- a/help/html/misc/aminoAcids.html +++ b/help/html/misc/aminoAcids.html @@ -1,291 +1,309 @@ - -
A | -Ala | -Alanine | -aliphatic - hydrophobic - neutral |
- GCT - GCC - GCA - GCG |
- - |
B | -- | either aspartic acid or asparagine | -- | - | - |
C | -Cys | -Cysteine | -polar - hydrophobic - neutral |
- TGT - TGC |
- - |
D | -Asp | -Aspartic Acid | -polar - hydrophilic - charged (-) |
- GAT - GAC |
- - |
E | -Glu | -Glutamic Acid | -polar - hydrophilic - charged (-) |
- GAA - GAG |
- - |
F | -Phe | -Phenylalanine | -aromatic - hydrophobic - neutral |
- TTT - TTC |
- - |
G | -Gly | -Glycine | -- | GGT - GGC - GGA - GGG |
- - |
H | -His | -Histidine | -aromatic - polar - hydrophilic - charged (+) |
- CAT - CAC |
- - |
I | -Ile | -Isoleucine | -aliphatic - hydrophobic - neutral |
- ATT - ATC - ATA |
- - |
K | -Lys | -Lysine | -- | AAA - AAG |
- - |
L | -Leu | -Leucine | -aliphatic - hydrophobic - neutral |
- TTG - TTA - CTT - CTC - CTA - CTG |
- - |
M | -Met | -Methionine | -hydrophobic - neutral |
- ATG | -- |
N | -Asn | -Asparagine | -polar - hydrophilic - neutral |
- AAT - AAC |
- - |
P | -Pro | -Proline | -hydrophobic - neutral |
- CCT - CCC - CCA - CCG |
- - |
Q | -Gln | -Glutamine | -polar - hydrophilic - neutral |
- CAA - CAG |
- - |
R | -Arg | -Arginine | -polar - hydrophilic - charged (+) |
- CGT - CGC - CGA - CGG - AGA - AGG |
- - |
S | -Ser | -Serine | -polar - hydrophilic - neutral |
- TCT - TCC - TCA - TCG - AGT - AGC |
- - |
T | -Thr | -Threonine | -polar - hydrophilic - neutral |
- ACT - ACC - ACA - ACG |
- - |
V | -Val | -Valine | -aliphatic - hydrophobic - neutral |
- GTT - GTC - GTA - GTG |
- - |
W | -Trp | -Tryptophan | -aromatic - hydrophobic - neutral |
- TGG | -- |
X | -- | UNKNOWN | -- | - | - |
Y | -Tyr | -Tyrosine | -aromatic - polar - hydrophobic |
- TAT - TAC |
- - |
Z | -- | either glutamic acid or glutamine | -- | - | - |
- | End | -Terminator | -- | TAA - TAG - TGA |
- - |
A | +Ala | +Alanine | +aliphatic + hydrophobic + neutral |
+ GCT + GCC + GCA + GCG |
+ + |
B | ++ | either aspartic acid or asparagine | ++ | + | + |
C | +Cys | +Cysteine | +polar + hydrophobic + neutral |
+ TGT + TGC |
+ + |
D | +Asp | +Aspartic Acid | +polar + hydrophilic + charged (-) |
+ GAT + GAC |
+ + |
E | +Glu | +Glutamic Acid | +polar + hydrophilic + charged (-) |
+ GAA + GAG |
+ + |
F | +Phe | +Phenylalanine | +aromatic + hydrophobic + neutral |
+ TTT + TTC |
+ + |
G | +Gly | +Glycine | ++ | GGT + GGC + GGA + GGG |
+ + |
H | +His | +Histidine | +aromatic + polar + hydrophilic + charged (+) |
+ CAT + CAC |
+ + |
I | +Ile | +Isoleucine | +aliphatic + hydrophobic + neutral |
+ ATT + ATC + ATA |
+ + |
K | +Lys | +Lysine | ++ | AAA + AAG |
+ + |
L | +Leu | +Leucine | +aliphatic + hydrophobic + neutral |
+ TTG + TTA + CTT + CTC + CTA + CTG |
+ + |
M | +Met | +Methionine | +hydrophobic + neutral |
+ ATG | ++ |
N | +Asn | +Asparagine | +polar + hydrophilic + neutral |
+ AAT + AAC |
+ + |
P | +Pro | +Proline | +hydrophobic + neutral |
+ CCT + CCC + CCA + CCG |
+ + |
Q | +Gln | +Glutamine | +polar + hydrophilic + neutral |
+ CAA + CAG |
+ + |
R | +Arg | +Arginine | +polar + hydrophilic + charged (+) |
+ CGT + CGC + CGA + CGG + AGA + AGG |
+ + |
S | +Ser | +Serine | +polar + hydrophilic + neutral |
+ TCT + TCC + TCA + TCG + AGT + AGC |
+ + |
T | +Thr | +Threonine | +polar + hydrophilic + neutral |
+ ACT + ACC + ACA + ACG |
+ + |
V | +Val | +Valine | +aliphatic + hydrophobic + neutral |
+ GTT + GTC + GTA + GTG |
+ + |
W | +Trp | +Tryptophan | +aromatic + hydrophobic + neutral |
+ TGG | ++ |
X | ++ | UNKNOWN | ++ | + | + |
Y | +Tyr | +Tyrosine | +aromatic + polar + hydrophobic |
+ TAT + TAC |
+ + |
Z | ++ | either glutamic acid or glutamine | ++ | + | + |
+ | End | +Terminator | ++ | TAA + TAG + TGA |
+ + |