X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Freleases.html;h=19c6d53bfbc531648816c93f561897f35620a106;hb=dfd7cf670ad87f1377e61e80d4c481caf1fe11b2;hp=a7f6cfddf5c642d3bab4c5e1c8d47537ec791949;hpb=c554d41a4effc6719895bda6b3abc04c032715a8;p=jalview.git

diff --git a/help/html/releases.html b/help/html/releases.html
index a7f6cfd..19c6d53 100755
--- a/help/html/releases.html
+++ b/help/html/releases.html
@@ -17,9 +17,80 @@
 		</td>
 	</tr>
 	<tr>
+	
 		<td>
+		<div align="center"><strong>2.4.1</strong><br>
+		<em>Not Yet Released</em></div>
+		</td>
+		<td>
+		<ul>
+		<li>Fetch DB References capabilities and UI expanded to support retrieval from DAS sequence sources</li> 
+		<li>Local DAS Sequence sources can be added via the command line or via the Add local source dialog box.</li>
+		<li>Enable or disable non-positional feature and database references in sequence ID tooltip from View menu in application.
+		</li>
+		<li>URL links generated from description line for regular-expression based URL links (applet and application)
+		</li>
+		<li>Non-positional features displayed in sequence ID tooltip on applet
+		</li>
+		<li>Non-positional feature URL links are shown in link menu (applet and application)
+		</li>
+		<li>Automatic Scrolling option in View menu to display the currently highlighted region of an alignment.
+		</li>
+		<li>Improved VAMSAS synchronization (jalview archive used to preserve views, structures, and tree display settings)
+		</li>
+		<li>Sharing of selected regions between views and with other VAMSAS applications (Experimental feature!)
+		</li>
+		<li>New hidden columns and rows and representatives capabilities in annotations file (in progress - not yet fully implemented)</li>
+		<li>Order an alignment in order of average feature score or total feature count</li> 
+		</ul>
+		</td>
+		<td>
+		<ul>
+		<li>Better handling of exceptions during sequence retrieval</li>
+		<li>URL links generated for all feature links (bugfix)</li>
+		<li>Dasobert generated non-positional feature URL link text excludes the start_end suffix (application)</li>
+		<li>Added URL embedding instructions to features file documentation.</li>
+		<li>Codons containing ambiguous nucleotides translated as 'X' in peptide product</li>
+		<li>Sequence description lines properly shared via VAMSAS</li>
+		<li>Match case switch in find dialog box works for both sequence ID and sequence string and query strings do not have to be in upper case to match case-insensitively.</li>
+		<li>Sequence fetcher fetches multiple records for all data sources</li>
+		</ul>
+		</td>
+	
+	</tr>
+		<tr>
+	<td>
+	<div align="center"><strong>2.4.0.b2</strong><br>
+		28/10/2009</div>
+	</td>
+	<td>
+		<ul><li>Experimental support for google analytics usage tracking.</li>
+	<li>Jalview privacy settings (user preferences and docs).</li>
+	</ul>
+	</td>
+	<td>
+		<ul><li>Race condition in applet preventing startup in jre1.6.0u12+.</li>
+		<li>Exception when feature created from selection beyond length of sequence.</li>
+		<li>Allow synthetic PDB files to be imported gracefully</li>
+		<li>Sequence associated annotation rows associate with all sequences with a given id</li>
+		<li>Find function matches case-insensitively for sequence ID string searches</li>		
+		<li>Non-standard characters do not cause pairwise alignment to fail with exception</li>		
+		</ul><em>Application Issues</em><ul>
+		<li>Sequences are now validated against EMBL database</li>
+		<li>Sequence fetcher fetches multiple records for all data sources</li>
+		</ul>
+		<em>InstallAnywhere Issues</em>
+		<ul>
+		<li>Dock icon works for Mac OS X java (Mac 1.6 update issue with installAnywhere mechanism)</li>  
+		<li>Command line launching of JARs from InstallAnywhere version (java class versioning error fixed)</li>
+		</ul>
+	</td>
+	</tr>
+		<tr>
+	    <td>
+		
 		<div align="center"><strong>2.4</strong><br>
-		27/8//2008</div>
+		27/8/2008</div>
 		</td>
 		<td>
 			<em>User Interface</em>
@@ -168,7 +239,7 @@
 			<li>Visual delay indication for sequence retrieval and sequence fetcher initialisation</li>
 			<li>updated Application to use DAS 1.53e version of dasobert DAS client</li>
 			<li>Re-instated Full AMSA support and .amsa file association</li>
-			
+			<li>Fixed parsing of JNet Concise annotation <em>sans</em> sequences</li>  
 		</ul>
 		</td>
 	</tr>