X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Freleases.html;h=4a7276b5400c71a01653d9ed7fd5585efdf6306c;hb=60068a9887dba34c9e7cf49b2f5f53a6fdc15931;hp=3b5c702aa0ddf423de73c229870ba53db026dcfc;hpb=0899b780ab7063f91a92cfdafae40ff10df37b86;p=jalview.git diff --git a/help/html/releases.html b/help/html/releases.html index 3b5c702..4a7276b 100755 --- a/help/html/releases.html +++ b/help/html/releases.html @@ -70,33 +70,109 @@ li:before {
- 2.10.5
4/09/2018
+ 2.10.5
6/09/2018
-
+
  • + Default memory for Jalview webstart and + InstallAnywhere increased to 1G. +
  • +
  • + Hidden sequence markers and representative + sequence bolding included when exporting alignment as EPS, + SVG, PNG or HTML. Display is configured via the + Format menu, or for command-line use via a jalview + properties file. +
  • +
  • + Ensembl client updated to Version 7 REST + API and sequence data now imported as JSON. +
  • +
  • + Change in recommended way of starting + Jalview via a Java command line: add jars in lib directory + to CLASSPATH, rather than via the deprecated java.ext.dirs + property. +
  • + + Development + +
    +
  • + Poorly scaled bar in quality annotation + row shown in Feredoxin Structure alignment view of example + alignment. +
  • +
  • + Annotation obscures sequences if lots of + annotation displayed. +
  • +
  • + Group conservation/consensus not shown + for newly created group when 'Apply to all groups' + selected +
  • +
  • + Corrupted display when switching to + wrapped mode when sequence panel's vertical scrollbar is + visible. +
  • +
  • + Alignment is black in exported EPS file + when sequences are selected in exported view. +
  • +
  • + Groups with different coloured borders + aren't rendered with correct colour. +
  • +
  • + Jalview could hang when importing certain + types of knotted RNA secondary structure. +
  • +
  • + Sequence highlight and selection in + trimmed VARNA 2D structure is incorrect for sequences that + do not start at 1. +
  • +
  • + '.' inserted into RNA secondary structure + annotation when columns are inserted into an alignment, + and when exporting as Stockholm flatfile. +
  • +
  • + Jalview annotation rows containing upper + and lower-case 'E' and 'H' do not automatically get + treated as RNA secondary structure. +
  • +
  • + .jvp should be used as default extension + (not .jar) when saving a jalview project file. +
  • +
  • + Mac Users: closing a window correctly + transfers focus to previous window on OSX +
  • + + Java 10 Issues +