X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Freleases.html;h=8e8813959c25d050e5b42792f0dabe730b88720d;hb=7dd64f49322e3902d14a498a32e341191d2ba676;hp=dae461f809aa03af3f5481bb9ddb9019cd598d41;hpb=971707340a94a5ebf8fd8240700358d8274c31ba;p=jalview.git

diff --git a/help/html/releases.html b/help/html/releases.html
index dae461f..8e88139 100755
--- a/help/html/releases.html
+++ b/help/html/releases.html
@@ -68,21 +68,138 @@ li:before {
       </td>
     </tr>
     <tr>
-      <td width=="60" nowrap>
+      <td width="60" nowrap>
         <div align="center">
-          <strong><a name="Jalview.2.10.3b1">2.10.3b1</a><br /> <em>5/12/2017</em></strong>
+          <strong><a name="Jalview.2.10.4">2.10.4</a><br /> <em>1/05/2018</em></strong>
         </div>
       </td>
       <td><div align="left">
           <em></em>
+          <ul>
+            <li>
+              <!-- JAL-1847 JAL-2944 -->Structure Chooser controls to
+              control superposition of multiple structures and open
+              structures in existing views
+            </li>
+            <li>
+              <!-- JAL-984 -->Mouse cursor changes to indicate Sequence
+              ID and annotation area margins can be click-dragged to
+              adjust them.
+            </li>
+            <li>
+              <!-- JAL-2885 -->Jalview uses HTTPS for Uniprot, Xfam and
+              Ensembl services
+            </li>
+            <li>
+              <!-- JAL-2759 -->Improved performance for large alignments
+              and lots of hidden columns
+            </li>
+            <li>
+              <!-- JAL-2593 -->Improved performance when rendering lots
+              of features
+            </li>
+          </ul>
+          </div>
+      </td>
+      <td><div align="left">
+          <ul>
+            <li>
+              <!-- JAL-2778 -->Slow redraw when Overview panel shown
+              overlapping alignment panel
+            </li>
+            <li>
+              <!-- JAL-2666 -->Linked scrolling via protein horizontal
+              scroll bar doesn't work for some CDS/Protein views
+            </li>
+            <li>
+              <!-- JAL-2930 -->Trackpad scrolling is broken on OSX on
+              Java 1.8u153 onwards and Java 1.9u4+.
+            </li>
+            <li>
+              <!-- JAL-2924 -->Tooltip shouldn't be displayed for empty
+              columns in annotation row
+            </li>
+            <li>
+              <!-- JAL-2913 -->Preferences panel's ID Width control is
+              honored in interactive and batch mode
+            </li>
+            <li>
+              <!-- JAL-2945 -->Linked sequence highlighting doesn't work
+              for structures added to existing Jmol view
+            </li>
+            <li>
+              <!-- JAL-2223 -->'View Mappings' includes duplicate
+              entries after importing project with multiple views
+            </li>
+            <li>
+              <!-- JAL-2781 JAL-2780 -->Viewing or annotating Uniprot
+              protein sequences via SIFTS from associated PDB entries
+              with negative residue numbers or missing residues fails
+            </li>
+            <li>
+              <!-- JAL-2952 -->Exception when shading sequence with negative
+              Temperature Factor values from annotated PDB files (e.g.
+              as generated by CONSURF)
+            </li>
+            <li>
+              <!-- JAL-2954 -->Selecting columns from highlighted regions
+              very slow for alignments with large numbers of sequences
+            </li>
+            <li><!-- JAL-2925 -->Copy Consensus fails for group consensus with 'StringIndexOutOfBounds'</li>
+            <li><em>New Defects</em>
+            <ul>
+                <li>
+                  <!-- JAL-2946 -->'SIFTS Mapping Error' when viewing
+                  structures for protein subsequence (if 'Trim Retrieved
+                  Sequences' enabled) or Ensembl isoforms (Workaround in
+                  2.10.4 is to fail back to N&amp;W mapping)
+                </li>
+              </ul>
+          </ul>
+          <em>Applet</em>
+          <ul>
+            <li>
+              <!-- JAL-2926 -->Copy consensus sequence option in applet
+              should copy the group consensus when popup is opened on it
+            </li>
+
+          </ul>
+          <em>New Known Defects</em>
+          <ul>
+            <li>
+              <!-- JAL-2973 --> Exceptions occasionally raised when
+              editing a large alignment and overview is displayed
+            </li>
+            <li>
+              <!-- JAL-2974 -->'Overview updating' progress bar is shown
+              repeatedly after a series of edits even when the overview
+              is no longer reflecting updates
+            </li>
+          </ul>
+        </div>
+          </td>
+    </tr>
+    <tr>
+      <td width="60" nowrap>
+        <div align="center">
+          <strong><a name="Jalview.2.10.3b1">2.10.3b1</a><br /> <em>24/1/2018</em></strong>
+        </div>
       </td>
       <td><div align="left">
+          <ul><li>Updated Certum Codesigning Certificate
+              (Valid till 30th November 2018)</li></ul></div></td>
+      <td><div align="left">
+          <em>Desktop</em><ul>
           <ul>
+            <li><!-- JAL-2859-->Only one structure is loaded when several sequences and structures are selected for viewing/superposing</li>
             <li><!-- JAL-2851-->Alignment doesn't appear to scroll vertically via trackpad and scrollwheel</li>
             <li><!-- JAL-2842-->Jalview hangs if up/down arrows pressed in cursor mode when cursor lies in hidden region at start of alignment</li>
             <li><!-- JAL-2827-->Helix annotation has 'notches' when scrolled into view if columns are hidden</li>
-
-          <ul>
+            <li><!-- JAL-2740-->Annotation column filter can be slow to reset (ie after hitting cancel) for large numbers of hidden columns</li>
+            <li><!-- JAL-2849-->User preference for disabling inclusion of sequence limits when exporting as flat file has no effect</li>             
+            <li><!-- JAL-2679-->Reproducible cross-reference relationships when retrieving sequences from EnsemblGenomes</li>  
+          </ul>
+          </div>
       </td>
     </tr>
     <tr>