X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2Freleases.html;h=a7f6cfddf5c642d3bab4c5e1c8d47537ec791949;hb=c554d41a4effc6719895bda6b3abc04c032715a8;hp=1bd9aefcc75cb1fbe33f39eab7cbe5463780d364;hpb=4fa627f1c99ed8b61c772d52556d8ad3d01ef1dc;p=jalview.git
diff --git a/help/html/releases.html b/help/html/releases.html
index 1bd9aef..a7f6cfd 100755
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-
-
-
- Release |
- New Features |
- Issues Resolved |
-
-
-
- 2.1.1
- 12/9/06 |
- |
-
- - Image output - rightmost residues are rendered if sequence id panel
- has been resized
- - Image output - all offscreen group boundaries are rendered
- - Annotation files with sequence references - all elements in file are
- relative to sequence position
- - Mac Applet users can use Alt key for group editing
- |
-
-
- 2.1
- 22/8/06 |
-
- - MAFFT Multiple Alignment in default Web Service list
- - DAS Feature fetching
- - Hide sequences and columns
- - Export Annotations and Features
- - GFF file reading / writing
- - Associate structures with sequences from local PDB files
- - Add sequences to exisiting alignment
- - Recently opened files / URL lists
- - Applet can launch the full application
- - Applet has transparency for features (Java 1.2 required)
- - Applet has user defined colours parameter
- - Applet can load sequences from parameter "sequencex"
- |
-
- - Redundancy Panel reinstalled in the Applet
- - Monospaced font - EPS / rescaling bug fixed
- - Annotation files with sequence references bug fixed
- |
-
-
- 2.08.1
- 2/5/06 |
-
- - Change case of selected region from Popup menu
- - Choose to match case when searching
- - Middle mouse button and mouse movement can compress / expand the visible
- width and height of the alignment
- |
-
- - Annotation Panel displays complete JNet results
- |
-
-
- 2.08b
- 18/4/06 |
- |
-
- - Java 1.5 bug - InternalMessageDialog fix for threads
- - Righthand label on wrapped alignments shows correct value
- |
-
-
- 2.08
- 10/4/06 |
-
- - Editing can be locked to the selection area
- - Keyboard editing
- - Create sequence features from searches
- - Precalculated annotations can be loaded onto alignments
- - Features file allows grouping of features
- - Annotation Colouring scheme added
- - Smooth fonts off by default - Faster rendering
- - Choose to toggle Autocalculate Consensus On/Off
- |
-
- - Drag & Drop fixed on Linux
- - Jalview Archive file faster to load/save, sequence descriptions saved.
-
- |
-
-
- 2.07
- 12/12/05 |
-
- - PDB Structure Viewer enhanced
- - Sequence Feature retrieval and display enhanced
- - Choose to output sequence start-end after sequence name for file output
- - Sequence Fetcher WSDBFetch@EBI
- - Applet can read feature files, PDB files and can be used for HTML
- form input
- |
-
- - HTML output writes groups and features
- - Group editing is Control and mouse click
- - File IO bugs
- |
-
-
- 2.06
- 28/9/05 |
-
- - View annotations in wrapped mode
- - More options for PCA viewer
- |
-
- - GUI bugs resolved
- - Runs with -nodisplay from command line
- |
-
-
- 2.05b
- 15/9/05 |
-
- - Choose EPS export as lineart or text
- - Jar files are executable
- - Can read in Uracil - maps to unknown residue
- |
-
- - Known OutOfMemory errors give warning message
- - Overview window calculated more efficiently
- - Several GUI bugs resolved
- |
-
-
- 2.05
- 30/8/05 |
-
- - Edit and annotate in "Wrapped" view
- |
-
- - Several GUI bugs resolved
- |
-
-
- 2.04
- 24/8/05 |
-
- - Hold down mouse wheel & scroll to change font size
- |
-
- - Improved JPred client reliability
- - Improved loading of Jalview files
- |
-
-
- 2.03
- 18/8/05 |
-
- - Set Proxy server name and port in preferences
- - Multiple URL links from sequence ids
- - User Defined Colours can have a scheme name and added to Colour Menu
- - Choose to ignore gaps in consensus calculation
- - Unix users can set default web browser
- - Runs without GUI for batch processing
- - Dynamically generated Web Service Menus
- |
-
- - InstallAnywhere download for Sparc Solaris
- |
-
-
- 2.02
- 18/7/05 |
- |
-
- - Copy & Paste order of sequences maintains alignment order.
- |
-
-
- 2.01
- 12/7/05 |
-
- - Use delete key for deleting selection.
- - Use Mouse wheel to scroll sequences.
- - Help file updated to describe how to add alignment annotations.
- - Version and build date written to build properties file.
- - InstallAnywhere installation will check for updates at launch of Jalview.
- |
-
- - Delete gaps bug fixed.
- - FileChooser sorts columns.
- - Can remove groups one by one.
- - Filechooser icons installed.
- - Finder ignores return character when searching. Return key will initiate
- a search.
-
- |
-
-
- 2.0
- 20/6/05 |
- |
- |
-
-
-
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