X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2FwebServices%2FJABAWS.html;h=58950b920003a97cabb6a25f529a69c4c7e28acb;hb=a45774ee31d9f35d4eff46d54d7deab719afb092;hp=90de537816515a7618265fbe24ad9c8072f184a1;hpb=153dd62dc91da13ae732600e6ea55ddbe15eab39;p=jalview.git diff --git a/help/html/webServices/JABAWS.html b/help/html/webServices/JABAWS.html index 90de537..58950b9 100644 --- a/help/html/webServices/JABAWS.html +++ b/help/html/webServices/JABAWS.html @@ -1,7 +1,7 @@ + - * Jalview - A Sequence Alignment Editor and Viewer (Version 2.5) - * Copyright (C) 2010 J Procter, AM Waterhouse, G Barton, M Clamp, S Searle - * - * This file is part of Jalview. - * - * Jalview is free software: you can redistribute it and/or - * modify it under the terms of the GNU General Public License - * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. - * - * Jalview is distributed in the hope that it will be useful, but - * WITHOUT ANY WARRANTY; without even the implied warranty - * of MERCHANTABILITY or FITNESS FOR A PARTICULAR - * PURPOSE. See the GNU General Public License for more details. - * - * You should have received a copy of the GNU General Public License along with Jalview. If not, see . ---> - The JABAWS system @@ -46,7 +29,7 @@ service model, developed at the University of Dundee by Peter Troshin and Geoff Barton. This is an open source system that provides a framework for wrapping command line bioinformatics analysis programs that enables them to be executed locally or on a cluster using data and -analysis parameters provided by a program linked with JABAWS directly or +analysis parameters provided by a program linked with the JABA engine directly or accessing it remotely via its web services interface.

The list of JABAWS servers known to the Jalview desktop is shown in the Web Services Preferences @@ -65,7 +48,7 @@ for more information.

Configuring your own JABAWS services for use by Jalview
Once you have downloaded and installed JABAWS, and verified it is -working, all that is needed is to add your new JABAWS server's URL to +working, all that is needed is to add the URL for your JABAWS server(s) to the list in the
Web Services Preferences Panel. After adding your service and saving your preferences or hitting the 'refresh web services' button, you should be able to