X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2FwebServices%2Findex.html;h=6b5c5e1397a53215a67ad6bc074d386bbee4929f;hb=d906c1647498e5361a16edb58119b260e4404fa6;hp=de04ec1824a003826d86ce700dcbe88902252427;hpb=097286cf1aaa3767be06a2c99947265bc3417417;p=jalview.git
diff --git a/help/html/webServices/index.html b/help/html/webServices/index.html
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+++ b/help/html/webServices/index.html
@@ -2,9 +2,9 @@
Web Services
Web services
- A variety of web services are available from the Alignment window's
- Calculations→Web Service menu.
-
+
+A variety of web services are available from the Alignment window's
+ Web Service menu.
Jalview's distributed computations are SOAP based services exposing
protein sequence alignment and secondary structure prediction programs. These services actually run
on the cluster based in the School of Life Sciences, University of
@@ -21,17 +21,33 @@
possible for some services.
Current services:
-
- - ClustalW Multiple Alignment
- The clustal W service remains one of the more popular Jalview features.
+ Multiple
+ Sequence Alignment Services
+ - ClustalW Multiple Alignment and re-alignment
+ The clustal W service remains one of the more
+ popular Jalview features.
- - Muscle Multiple Alignment
+ - Muscle Multiple Alignment
High Quality and High Throughput multiple alignments of proteins. This
method can sometimes be more accurate than ClustalW when dealing with
diverse sets of sequences.
- - JNet Secondary Structure Prediction
- This is a front end to the existing JNet www server.
+ - MAFFT
+ Multiple Alignment with Fast Fourier Transforms -
+ a highly accurate and high throughput dna and amino
+ acid alignment method, performing at least as well
+ as ClustalW and Muscle.
+
+
+
+ - Secondary Structure Prediction
+
+ - JNet
This is a front end to the existing JNet
+ www server allowing single sequence or profile
+ based prediction.
+
+