X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2FwhatsNew.html;h=297233de91dd97a110bee36910d925156a9e8441;hb=9ee29162e3f41c2a60c50f1fda2f3d045adb658f;hp=fe70fb48d89f1d03410c47b15e2785e9726a6399;hpb=a8f483d04205bb8273ee311c12968b7e86d205fa;p=jalview.git diff --git a/help/html/whatsNew.html b/help/html/whatsNew.html index fe70fb4..297233d 100755 --- a/help/html/whatsNew.html +++ b/help/html/whatsNew.html @@ -1,74 +1,144 @@ + -->
- What's new ?
-
- Jalview 2.8.1 includes new features for group creation, RNA secondary
- structure prediction and a host bug fixes. It also includes support
- for version 2.1
- of JABA and includes a Spanish translation of its user interface.
- The highlights are detailed below, and the full list is given in the Jalview 2.8.1 Release Notes.
-
The Desktop and web based applet include new keystrokes for - defining and undefining groups, and PAM250 has been added to the range - of score models available for use by the tree and PCA calculations. - The Jalview project file format has also been extended for handling - RNA and protein secondary structure annotation, in anticipation for - new structure based secondary structure support in Jalview 2.8.2.
-Internationalisation
-Jalview 2.8.1 is the first release to include support for - displaying Jalview's user interface in different languages. In August - 2013, David Roldán-Martinez took on the task of - internationalising Jalview's user interface. He also recruited Sara - Hernández Díaz and Laura Ferrandis Martinez who created - Jalview's first spanish user interface translation.
-- If you notice any problems, or would like to help translate Jalview's - user interface into other languages, head over to issues.jalview.org and put in a - feature request describing the translations you can provide to the i18n - component. David has also documented - the process of creating i18n translations to help you get started. -
-RNA Secondary Structure Prediction with JABA 2.1
-- This version of Jalview includes a client to access the new services available in JABA v2.1 , which - provides services for RNA consensus secondary structure prediction and - two new alignment programs (GLProbs and MSAProbs).
-- To see how to perform RNA secondary structure predictions like the one below, take a look at the RNAAliFold - client documentation. -
-+ Jalview 2.10.2b1 bugfix release +
++ This is patch release for 2.10.2. See the release notes for full + details bugs addressed in this version, which also introduces + additional improvements to the overview panel, and patches for + several minor issues including the ability to correctly recover + cross-references for Uniprot protein sequences from Ensembl. +
++ What's new in Jalview 2.10.2 ? +
++ Version 2.10.2 was released in August 2017, and introduced new user + interface features, improved and more extensible tree and PCA + analysis, more robust 3D structure viewing with UCSF Chimera and an + updated service client for JABAWS. The full list of bug fixes and + new features can be found in the 2.10.2 Release Notes, but + the highlights are below. +
+
+ Scripting
New groovy examples
+ demonstrate Jalview 2.10.2 APIs for creation of data-driven
+ colourschemes, and custom alignment file handlers. The FeatureAnnotationWorker
+ introduced in Jalview 2.10 has also been refactored to allow
+ efficient counting across multiple feature types. Please be aware
+ that feature counter scripts created for earlier versions will not
+ execute in Jalview 2.10.2.
+
+ This release of Jalview introduces an Experimental Features + option in the Jalview Desktop's Tools menu that allows you + to try out features that are still in development. To access the + experimental features below - first enable the Tools→Enable + Experimental Features option, and then restart Jalview. +
+