X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2FwhatsNew.html;h=31b3f1f974e08a6ebe1750ac5af9387a806499f0;hb=966e2e639242c252f4ed9e5f0e3e91b0389bd2de;hp=b35c9ae0588bc3566ffbe465d14050ba8f87eb2b;hpb=24974fd5af8b5c2f223cc8f8c0f2f4beb8c4d509;p=jalview.git

diff --git a/help/html/whatsNew.html b/help/html/whatsNew.html
index b35c9ae..31b3f1f 100755
--- a/help/html/whatsNew.html
+++ b/help/html/whatsNew.html
@@ -11,20 +11,20 @@
 <p>If you were familiar with the original Jalview, here is a list of important
   features you should know about the current development:</p>
 <ul>
-  <li>Editing sequences is no longer the default when mouse clicking the alignment. 
-    Instead, mouse clicking on the alignment creates a &quot;selection region&quot; 
+  <li>Editing sequences is no longer the default when mouse clicking the alignment.
+    Instead, mouse clicking on the alignment creates a &quot;selection region&quot;
     which may be full sequences or groups of residues.</li>
-  <li>To insert or edit the gaps in one sequence in alignment, the &quot;Shift&quot; 
+  <li>To insert or edit the gaps in one sequence in alignment, the &quot;Shift&quot;
     key must be held down when dragging the mouse.</li>
-  <li>To insert or edit gaps for a group of sequences, the &quot;Alt&quot; key 
+  <li>To insert or edit gaps for a group of sequences, the &quot;Alt&quot; key
     (or in X windows the &quot;Control&quot; key) must be held down.</li>
-  <li>Selecting colour schemes in the colour menu either sets just the &quot;background&quot; 
-    colourscheme for the alignment, or - when the tickbox &quot;Apply colour to 
-    all groups&quot; is ticked, applies the scheme to the background and all groups 
+  <li>Selecting colour schemes in the colour menu either sets just the &quot;background&quot;
+    colourscheme for the alignment, or - when the tickbox &quot;Apply colour to
+    all groups&quot; is ticked, applies the scheme to the background and all groups
     defined on the alignment.</li>
-  <li>Use the right mouse button (apple and click on the Mac) whilst the pointer 
-    is within the selection area to access the &quot;define&quot; region menu 
-    to define a new region, give it a name, and change its colourscheme and display 
+  <li>Use the right mouse button (apple and click on the Mac) whilst the pointer
+    is within the selection area to access the &quot;define&quot; region menu
+    to define a new region, give it a name, and change its colourscheme and display
     properties.</li>
   <li>Conservation is automatically updated whenever the alignment is edited</li>
   <li>There is no &quot;quick draw&quot; option</li>
@@ -37,39 +37,66 @@
     <td><div align="center"><em><strong>Issues Resolved</strong></em></div></td>
   </tr>
   <tr> 
-    <td> <div align="center"><strong>2.0</strong><br>
-        20/6/05</div></td>
-    <td ><ul>
-        <li> New codebase</li>
+    <td><div align="center"><strong>2.07</strong><br>
+        7 /12/05</div></td>
+    <td><ul>
+        <li>PDB Structure Viewer enhanced</li>
+        <li>Sequence Feature retrieval and display enhanced</li>
+        <li>Choose to output sequence start-end after sequence name for file output</li>
+        <li>Sequence Fetcher WSDBFetch@EBI</li>
+      </ul></td>
+    <td><ul>
+        <li>HTML output writes groups and features</li>
+        <li>Group editing is Control and mouse click</li>
+        <li>Applet can read feature files, PDB files and can be used for HTML 
+          form input</li>
       </ul></td>
-    <td >&nbsp;</td>
   </tr>
   <tr> 
-    <td><div align="center"><strong>2.01</strong><br>
-        12/7/05</div></td>
+    <td><div align="center"><strong>2.06</strong><br>
+        28/9/05</div></td>
     <td><ul>
-        <li>Use delete key for deleting selection.</li>
-        <li>Use Mouse wheel to scroll sequences.</li>
-        <li>Help file updated to describe how to add alignment annotations.</li>
-        <li>Version and build date written to build properties file.</li>
-        <li>InstallAnywhere installation will check for updates at launch of Jalview.</li>
+        <li>View annotations in wrapped mode</li>
+        <li>More options for PCA viewer</li>
       </ul></td>
     <td><ul>
-        <li>Delete gaps bug fixed.</li>
-        <li>FileChooser sorts columns.</li>
-        <li>Can remove groups one by one.</li>
-        <li>Filechooser icons installed.</li>
-        <li>Finder ignores return character when searching. Return key will initiate 
-          a search.<br>
-        </li>
+        <li>GUI bugs resolved</li>
+        <li>Runs with -nodisplay from command line</li>
       </ul></td>
   </tr>
   <tr> 
-    <td> <div align="center"><strong>2.02</strong><br>
-        18/7/05</div></td>
-    <td>&nbsp;</td>
+    <td><div align="center"><strong>2.05b</strong><br>
+        15/9/05</div></td>
     <td><ul>
-        <li>Copy &amp; Paste order of sequences maintains alignment order.</li>
+        <li>Choose EPS export as lineart or text</li>
+        <li>Jar files are executable</li>
+        <li>Can read in Uracil - maps to unknown residue</li>
+      </ul></td>
+    <td><ul>
+        <li>Known OutOfMemory errors give warning message</li>
+        <li>Overview window calculated more efficiently</li>
+        <li>Several GUI bugs resolved</li>
+      </ul></td>
+  </tr>
+  <tr> 
+    <td><div align="center"><strong>2.05</strong><br>
+        30/8/05</div></td>
+    <td><ul>
+        <li>Edit and annotate in &quot;Wrapped&quot; view</li>
+      </ul></td>
+    <td><ul>
+        <li>Several GUI bugs resolved</li>
+      </ul></td>
+  </tr>
+  <tr> 
+    <td><div align="center"><strong>2.04</strong><br>
+        24/8/05</div></td>
+    <td><ul>
+        <li>Hold down mouse wheel &amp; scroll to change font size</li>
+      </ul></td>
+    <td><ul>
+        <li>Improved JPred client reliability</li>
+        <li>Improved loading of Jalview files</li>
       </ul></td>
   </tr>
   <tr> 
@@ -88,6 +115,42 @@
         <li>InstallAnywhere download for Sparc Solaris</li>
       </ul></td>
   </tr>
+  <tr> 
+    <td> <div align="center"><strong>2.02</strong><br>
+        18/7/05</div></td>
+    <td>&nbsp;</td>
+    <td><ul>
+        <li>Copy &amp; Paste order of sequences maintains alignment order.</li>
+      </ul></td>
+  </tr>
+  <tr> 
+    <td><div align="center"><strong>2.01</strong><br>
+        12/7/05</div></td>
+    <td><ul>
+        <li>Use delete key for deleting selection.</li>
+        <li>Use Mouse wheel to scroll sequences.</li>
+        <li>Help file updated to describe how to add alignment annotations.</li>
+        <li>Version and build date written to build properties file.</li>
+        <li>InstallAnywhere installation will check for updates at launch of Jalview.</li>
+      </ul></td>
+    <td><ul>
+        <li>Delete gaps bug fixed.</li>
+        <li>FileChooser sorts columns.</li>
+        <li>Can remove groups one by one.</li>
+        <li>Filechooser icons installed.</li>
+        <li>Finder ignores return character when searching. Return key will initiate 
+          a search.<br>
+        </li>
+      </ul></td>
+  </tr>
+  <tr> 
+    <td> <div align="center"><strong>2.0</strong><br>
+        20/6/05</div></td>
+    <td ><ul>
+        <li> New codebase</li>
+      </ul></td>
+    <td >&nbsp;</td>
+  </tr>
 </table>
 <p>&nbsp;</p>
 </body>