X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2FwhatsNew.html;h=44e0961a467d04cfdea0d0d37f106bffc1fe695f;hb=6f32b630c64f46bc3157f4ec748ef05b985df5bb;hp=98f01dcb37f40bf99cffaaa3dcc1c60df63647fa;hpb=244a1460b0d7ae9a7a8c57d3a767b327788e8bd3;p=jalview.git
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+
What's new ?
What's new ?
-Jalview Version 2.4
+The Jalview 2.6.1 release fixes a number of minor bugs affecting
+Jalview operation, including issues affecting the import and export of
+PIR files and working with multiple multiple structure superpositions.
+For full details see the Jalview
+2.6.1 release history.
+Highlights in Jalview Version 2.6
- VAMSAS Interoperation Client
- DAS Sequence Fetching
- PFAM full alignment retrieval
- DNA/Protein Product traversal (Experimental)
- .. (more to come)
- URL links can be generated using regular
- expressions and created for sequence database cross references
-
-Issues Resolved
-
- .. (more to come)
+ - JABA Web Services for
+ multiple alignment using:
+
+ - ClustalW
+ - MAFFT
+ - Muscle
+ - ProbCons
+ - T-COFFEE
+
+
+ - User modifiable alignment service parameters
+ - Visualization of superposed structures associated with protein
+ or nucleotide sequence alignments.
+ - Export coordinates and projection as CSV from PCA viewer
-<--Jalview Version 2.3
+Issues Resolved (a select list - see release
+history for details)
- Jmol 11.0.2 integration
- PDB views stored in Jalview XML files
- Slide sequences
- Edit sequence in place
- EMBL CDS features
- DAS Feature mapping
- Feature ordering
- Alignment Properties
- Annotation Scores
- Sort by scores
- Feature/annotation editing in applet
+
-Issues Resolved
-
- Headless state operation in 2.2.1
- Incorrect and unstable DNA pairwise alignment
- Cut and paste of sequences with annotation
- Feature group display state in XML
- Feature ordering in XML
- 2.2.1 applet had no feature transparency
- Number pad keys can be used in cursor mode
- Structure Viewer mirror image resolved
-
-->
-
See the Release History page for
details of all new features and resolved issues.