X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2FwhatsNew.html;h=4dfc54e201bb54ba3074ac62ae61e29135f9e099;hb=0e575263043797b2e9bbd74386cd5851c09433af;hp=0effdb4d4a84842c9cb7cf3c2cf1a127c011076f;hpb=d4ef98f0268e25530ba9cf4812d739d9b54d1f36;p=jalview.git diff --git a/help/html/whatsNew.html b/help/html/whatsNew.html index 0effdb4..4dfc54e 100755 --- a/help/html/whatsNew.html +++ b/help/html/whatsNew.html @@ -24,21 +24,34 @@

- What's new ? + What's new in Jalview 2.10.5 ?

- Jalview 2.10 is the next major release in the Jalview 2 series. Full details are in the - Jalview 2.10 Release Notes, but the highlights are below. -

- Highlights in Jalview 2.10 +

Jalview 2.10.5 is a minor release that includes critical + patches for users working with Ensembl, and RNA secondary structure + annotation.

Ensembl sequence fetcher. Annotated Genes, transcripts and - proteinsÂ can be retrieved via Jalview's new Ensembl REST client.
Improved sequence/structure mappings. - Jalview now utilises the PDBe's SIFTS database (at EMBL-EBI) to - match PDB data positions in Uniprot sequences.
EPS, PNG and SVG export now includes hidden sequence + markers, and representative sequences are marked in bold.
Ensembl Client updated for Ensembl Rest API v7.
The + latest Ensembl API is not backwards compatible with earlier + versions of Jalview, so if you require Ensembl functionality you + will need to install this release. +
Improved support for VIENNA extended dot-bracket notation + for RNA secondary structure
Positional and selected region highlighting in VARNA + 'trimmed sequence' view now more reliable

- +

+ The full list of bugs fixed in this release can be found in the 2.10.5 Release Notes. The majority of improvement in 2.10.5 are due to Jalview users + contacting us via the jalview-discuss email list. Thanks to everyone + who took the time to do this !

Jalview and Java 10

This release addresses a critical bug for OSX users who are + running Jalview with Java 10 which can prevent files being saved + correctly through the 'Save As' dialog box. The 'Save As' dialog for + Jalview's Groovy Console remains affected - we hope to address this + in the next major release.