X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2FwhatsNew.html;h=ac086c813833e3225cf24116a9aa88386e1d96d6;hb=0bbc71f6241b82843cd2ad0780b64f9479447a87;hp=a74e5b73a22e00b47155e344939dca12329efa38;hpb=d0771875f23ab994c4f85fb6cd604378768df10e;p=jalview.git
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- What's new ?
+ What's new in Jalview 2.10.5 ?
-
- Jalview 2.10 is the next major release in the Jalview 2 series. Full details are in the
- Jalview 2.10 Release Notes, but the highlights are below.
-
-
- Highlights in Jalview 2.10
+
Jalview 2.10.5 is a minor release that includes critical
+ patches for users working with Ensembl, and RNA secondary structure
+ annotation.
- - Ensembl sequence fetcher. Annotated Genes, transcripts and
- proteins can be retrieved via Jalview's new Ensembl REST client.
- - Improved sequence/structure mappings.
- Jalview now utilises the PDBe's SIFTS database (at EMBL-EBI) to
- match PDB data positions in UniProt sequences.
+ - EPS, PNG and SVG export now includes hidden sequence
+ markers, and representative sequences are marked in bold.
+ - Ensembl Client updated for Ensembl Rest API v7.
The
+ latest Ensembl API is not backwards compatible with earlier
+ versions of Jalview, so if you require Ensembl functionality you
+ will need to install this release.
+
+ - Improved support for VIENNA extended dot-bracket notation
+ for RNA secondary structure
+ - Positional and selected region highlighting in VARNA
+ 'trimmed sequence' view now more reliable
-
+ The majority of improvement in 2.10.5 are due to Jalview users
+ contacting us via the jalview-discuss email list. Thanks to everyone
+ who took the time to do this !
+
+ The full list of bugs fixed in this release can be found in the 2.10.5 Release Notes.
+