The RNAalifold client was implemented by Jalview's 2013 - summer student, Dan Barton. -
- What's new ?
-
- Jalview 2.8.1 includes new features for group creation, RNA secondary
- structure prediction and a host bug fixes. It also includes support
- for version 2.1
- of JABA and includes a Spanish translation of its user interface.
- The highlights are detailed below, and the full list is given in the Jalview 2.8.1 Release Notes.
-
The Desktop and web based applet include new keystrokes for - defining and undefining groups, and PAM250 has been added to the range - of score models available for use by the tree and PCA calculations. - The Jalview project file format has also been extended for handling - RNA and protein secondary structure annotation, in anticipation for - new structure based secondary structure support in Jalview 2.8.2.
-Internationalisation
-Jalview 2.8.1 is the first release to include support for - displaying Jalview's user interface in different languages. In August - 2013, David Roldán-Martinez took on the task of - internationalising Jalview's user interface. He also recruited Sara - Hernández Díaz and Laura Ferrandis Martinez who created - Jalview's first spanish user interface translation.
-- If you notice any problems, or would like to help translate Jalview's - user interface into other languages, head over to issues.jalview.org and put in a - feature request describing the translations you can provide to the i18n - component. David has also documented - the process of creating i18n translations to help you get started. + What's new ?
-RNA Secondary Structure Prediction with JABA 2.1
-- This version of Jalview includes a client to access the new services available in JABA v2.1 , which - provides services for RNA consensus secondary structure prediction and - two new alignment programs (GLProbs and MSAProbs).
- To see how to perform RNA secondary structure predictions like the one below, take a look at the RNAAliFold
- client documentation.
+ Jalview 2.8.2 is the first release produced by our new core
+ development team.
It incorporates many minor improvements and
+ bug-fixes, and also includes new features for working with 3D
+ structure data, shading alignments by secondary structure and
+ generation of alignment figures as Scalable Vector Graphics.
As
+ ever, the highlights are detailed below, and the full list is given in
+ the Jalview 2.8.2 Release
+ Notes.