X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=help%2Fhtml%2FwhatsNew.html;h=cf96d474e209855f2d8c501f9bb9c81286f6b97b;hb=7a9adf94a201d360b215b0bab0178a656e52148e;hp=9c13b59d5a5643b8b2a2b6a72f80a3f8a3782325;hpb=90255554ddb63f5474c11afcaba96d23ffd88a46;p=jalview.git diff --git a/help/html/whatsNew.html b/help/html/whatsNew.html index 9c13b59..cf96d47 100755 --- a/help/html/whatsNew.html +++ b/help/html/whatsNew.html @@ -1,56 +1,103 @@ - -What's new ? - -

What's new ?

-

Jalview Version 2.08

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Editing can be locked to the - selection area so that any edits made within the locked area do - not unexpectedly shift other parts of the alignment.

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Keyboard editing - press F2 to toggle cursor mode On / Off. For a full list - of keyboard controls, look here.

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Create sequence features from searches. - Previously, the regions of sequences highlighted as the result of - searches were added as new regions in the alignment. Now, the sequence region - selected by a search can be used to define named sequences features - attached to the sequence, rather than the alignment. -

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Sequence feature display and rendering has also been enhanced, with - the addition of sequence feature groups (which can be used to show - or hide a set of features en masse) and user defined - feature colours as well as transparency controls, using the Sequence Feature Settings - window. The Features file - has also been extended to accomodate these enhancements.

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Alignment annotation and colouring is also considerably - enhanced. Precalculated symbolic and quantitative annotations (text labels, - secondary structure symbols and multiple scalar graphs) can now be - loaded onto alignments via the Annotation - File. Additionally, the Annotation - Colouring dialog box allows an alignment to be coloured based on - any of the graphed quantities with which it is annotated.

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Rendering speed has been improved by disabling anti-aliasing via - the Smooth Fonts - option in the View - menu (its default set in Preferences). In addition, response - times when editing alignments can be reduced by turning off the automatic - calculation of amino acid property Consensus (which has been - reintroduced to the Calculate menu as Autocalculate Consensus).
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Issues Resolved

- -

See the Release History page for details of all - new features and resolved issues.

- - + + + +What's new ? + + +

+ What's new ? +

+

+ The Jalview 2.7 release features new web services, and important + improvements to the way in which Jalview handles alignments and + associated PDB structures, as well as numerous minor improvements and + bug fixes. Version 2.7 of the JalviewLite applet also features a + significantly enhanced Javascript API enabling it to be more easily + integrated with javascript based web applications.
For full + details see the Jalview 2.7 + release history. +

+

+ Highlights in Jalview Desktop Version 2.7 +

+ + +

+ Issues Resolved (a select list - see the release history for full details) + +

+

+ Issues in the Jalview Desktop +

+ Issues specific to the JalviewLite Applet + + Issues affecting both applet and application + + +