X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=resources%2Fembl_mapping.xml;h=7a1f585fab38089d560525f9a5b2e16843a16eeb;hb=797df64fa2a0a30773d0f48f5494d4155e5a8be3;hp=2f3f046e86c72e9a53ec65a0d847c4b0d89cf9a3;hpb=9c489b384be6d73e66269ae70649a223933fea1a;p=jalview.git

diff --git a/resources/embl_mapping.xml b/resources/embl_mapping.xml
index 2f3f046..7a1f585 100644
--- a/resources/embl_mapping.xml
+++ b/resources/embl_mapping.xml
@@ -1,12 +1,27 @@
 <?xml version="1.0"?>
 <!--
-	History: Originally created from EMBL_common_V1.0
-	Updated on 24th April 2007 for WsDBFetch Service move to EMBL_Services_V1.1.xsd
-	-->
-	
+ * Jalview - A Sequence Alignment Editor and Viewer (Version 2.7)
+ * Copyright (C) 2011 J Procter, AM Waterhouse, J Engelhardt, LM Lui, G Barton, M Clamp, S Searle
+ * 
+ * This file is part of Jalview.
+ * 
+ * Jalview is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License 
+ * as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
+ * 
+ * Jalview is distributed in the hope that it will be useful, but 
+ * WITHOUT ANY WARRANTY; without even the implied warranty 
+ * of MERCHANTABILITY or FITNESS FOR A PARTICULAR 
+ * PURPOSE.  See the GNU General Public License for more details.
+ * 
+ * You should have received a copy of the GNU General Public License along with Jalview.  If not, see <http://www.gnu.org/licenses/>.
+-->
 <mapping xmlns="http://castor.exolab.org/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
 	xsi:schemaLocation="http://castor.exolab.org/ ../schemas/castor-mapping.xsd">
-	<!-- -->
+<!--
+	History: Originally created from EMBL_common_V1.0
+	Updated on 24th April 2007 for WsDBFetch Service move to EMBL_Services_V1.1.xsd
+	-->
 	<class name="jalview.datamodel.xdb.embl.EmblFile">
 		<map-to xml="EMBL_Services"/>
 		<field name="entries" type="jalview.datamodel.xdb.embl.EmblEntry" collection="vector">
@@ -19,8 +34,8 @@
 	</class>
 	<class name="jalview.datamodel.xdb.embl.EmblEntry">
 		<map-to xml="entry"/>
-		<field name="accession" type="string">
-			<bind-xml location="accession" node="attribute"/>
+		<field name="accession" type="string">
+			<bind-xml location="accession" node="attribute"/>
 		</field>
 		<field name="lastUpdated" type="string">
 			<bind-xml location="last-updated" node="attribute"/>
@@ -35,14 +50,14 @@
 		<field name="rLastUpdated" type="string">
 			<bind-xml location="releaseLastUpdated" node="attribute"/>
 		</field>
-		<field name="desc" type="string">
-			<bind-xml name="description" node="element"/>
+		<field name="desc" type="string">
+			<bind-xml name="description" node="element"/>
 		</field>
 		<field name="Keywords" type="string" collection="vector">
 			<bind-xml name="keyword" node="element"/>
 		</field>
 		<field name="features" type="jalview.datamodel.xdb.embl.EmblFeature" collection="vector">
-			<bind-xml name="feature"/>
+			<bind-xml name="feature"/>
 		</field>
 		<field name="dbRefs" type="jalview.datamodel.DBRefEntry" collection="vector">
 			<bind-xml name="dbreference" />
@@ -51,7 +66,7 @@
 			<bind-xml name="sequence"/> <!-- location="sequence" node="element"/ -->
 		</field>
 	</class>
-	<class name="jalview.datamodel.xdb.embl.EmblSequence">
+	<class name="jalview.datamodel.xdb.embl.EmblSequence">
 		<map-to xml="sequence"/>
 		<field name="type" type="string">
 			<bind-xml name="type" node="attribute" location="type"/>
@@ -61,15 +76,15 @@
 		</field>
 		<field name="sequence" type="string">
 			<bind-xml node="text"/>
-		</field>
+		</field>
 	</class>
 	<class name="jalview.datamodel.xdb.embl.EmblFeature" verify-constructable="false">
 		<map-to xml="feature"/>
-		<field name="name" type="string">
-			<bind-xml name="name" node="attribute"/>
+		<field name="name" type="string">
+			<bind-xml name="name" node="attribute"/>
 		</field>
-		<field name="dbRefs" type="jalview.datamodel.DBRefEntry" collection="vector">
-			<bind-xml name="dbreference" node="element"/>
+		<field name="dbRefs" type="jalview.datamodel.DBRefEntry" collection="vector">
+			<bind-xml name="dbreference" node="element"/>
 		</field>
 		<field name="qualifiers" type="jalview.datamodel.xdb.embl.Qualifier" collection="vector">
 			<bind-xml name="qualifier"/>
@@ -89,7 +104,7 @@
 			<bind-xml name="secondary" node="attribute"/>
 		</field>
 	</class>
-	<class  name="jalview.datamodel.xdb.embl.Qualifier" verify-constructable="false">
+	<class  name="jalview.datamodel.xdb.embl.Qualifier" verify-constructable="false">
 		<map-to xml="Qualifier"/>
 		<field name="name">
 			<bind-xml name="name" node="attribute"/>
@@ -131,12 +146,12 @@
 			<bind-xml name="basePosition" node="element"/>
 		</field>
 	</class>
-	<class name="jalview.datamodel.xdb.embl.BasePosition">
+	<class name="jalview.datamodel.xdb.embl.BasePosition">
 		<map-to xml="basePosition"/>
-		<field name="type">
-			<bind-xml name="type" node="attribute"/>
+		<field name="type">
+			<bind-xml name="type" node="attribute"/>
 		</field>
-		<field name="pos">
+		<field name="pos">
 			<bind-xml node="text"/>
 		</field>
 	</class>