X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=resources%2Flang%2FMessages.properties;h=36572ed894771f7647625719930931e731be3f85;hb=beb2fee66dde629e3bbb7febb38d0116e1a64df2;hp=f280d667e42f7a9b367cc3754e752d09afea5b1c;hpb=072176426bbe5af5d6588b3a6eb6d5969fe1b01e;p=jalview.git

diff --git a/resources/lang/Messages.properties b/resources/lang/Messages.properties
index f280d66..36572ed 100644
--- a/resources/lang/Messages.properties
+++ b/resources/lang/Messages.properties
@@ -32,9 +32,18 @@ action.load_project = Load Project
 action.save_project = Save Project
 action.save_project_as = Save Project as...
 action.quit = Quit
-action.force_quit = Force Quit
-label.quit_jalview = Quit Jalview?
-label.save_in_progress = Some files are still saving.
+action.force_quit = Force quit
+label.quit_jalview = Are you sure you want to quit Jalview?
+label.wait_for_save = Wait for save
+label.unsaved_changes = There are unsaved changes.
+label.unsaved_alignments = There are unsaved alignments.
+label.save_in_progress = Some files are still saving:
+label.confirm_quit_viewer = An external viewer is still open.  Close the external window as well?
+label.confirm_quit_viewers = External viewers are still open.  Close these external windows as well?
+label.unknown = Unknown
+label.quit_after_saving = Jalview will quit after saving.
+label.all_saved = All files saved.
+label.quitting_bye = Quitting, bye!
 action.wait = Wait
 action.cancel_quit = Cancel quit
 action.expand_views = Expand Views
@@ -134,6 +143,8 @@ action.calculate = Calculate
 action.select_all = Select all
 action.select_highlighted_columns = Select Highlighted Columns
 tooltip.select_highlighted_columns = Press B to mark highlighted columns, Ctrl-(or Cmd)-B to toggle, and Alt-B to mark all but highlighted columns 
+action.copy_highlighted_regions = Copy Highlighted Regions
+tooltip.copy_highlighted_regions = Copies highlighted sequence regions to the clipboard for export or further analysis
 action.deselect_all = Deselect all
 action.invert_selection = Invert selection
 action.using_jmol = Using Jmol
@@ -205,13 +216,14 @@ label.colourScheme_turnpropensity = Turn Propensity
 label.colourScheme_buriedindex = Buried Index
 label.colourScheme_purine/pyrimidine = Purine/Pyrimidine
 label.colourScheme_nucleotide = Nucleotide
+label.colourScheme_nucleotideambiguity = Nucleotide Ambiguity
 label.colourScheme_t-coffeescores = T-Coffee Scores
 label.colourScheme_rnahelices = By RNA Helices
 label.colourScheme_sequenceid = Sequence ID Colour
-label.colourScheme_gecos\:flower = gecos Flower
-label.colourScheme_gecos\:blossom = gecos Blossom
-label.colourScheme_gecos\:sunset = gecos Sunset
-label.colourScheme_gecos\:ocean = gecos Ocean
+label.colourScheme_gecos-flower = gecos Flower
+label.colourScheme_gecos-blossom = gecos Blossom
+label.colourScheme_gecos-sunset = gecos Sunset
+label.colourScheme_gecos-ocean = gecos Ocean
 label.blc = BLC
 label.fasta = Fasta
 label.msf = MSF
@@ -437,6 +449,7 @@ label.input_cut_paste_params = Cut & Paste Input - {0}
 label.alignment_output_command = Alignment output - {0}
 label.annotations = Annotations
 label.structure_options = Structure Options
+label.structure_import_options = Structure Import Options
 label.features = Features
 label.overview_params = Overview {0}
 label.paste_newick_file = Paste Newick file
@@ -505,6 +518,7 @@ label.delete_gaps = Delete {0} gaps
 label.sequence_details = Sequence Details
 label.viewer_help = {0} Help
 label.close_viewer = Close Viewer
+label.close_viewers = Close Viewers
 label.confirm_close_viewer = This will close Jalview''s connection to {0}.<br>Do you want to close the {1} window as well?
 label.all = All
 label.sort_by = Sort alignment by
@@ -540,6 +554,7 @@ label.select_colour_maximum_value = Select Colour for Maximum Value
 label.open_url_param = Open URL {0}
 label.open_url_seqs_param = Open URL ({0}..) ({1} seqs)
 label.load_pdb_file_associate_with_sequence = Load a PDB file and associate it with sequence {0}
+label.load_pae_matrix_file_associate_with_structure = Load a PAE matrix file and associate it with structure {0}
 label.reveal_hidden_columns = Reveal Hidden Columns with Right Mouse Button
 label.dark_colour = Dark Colour
 label.light_colour = Light Colour
@@ -694,6 +709,7 @@ label.select_outline_colour = Select Outline Colour
 label.web_browser_not_found_unix = Unixers\: Couldn't find default web browser.\nAdd the full path to your browser in Preferences."
 label.web_browser_not_found = Web browser not found
 label.select_pdb_file_for = Select a PDB file for {0}
+label.select_pae_matrix_file_for = Select a PAE matrix file for {0}
 label.html = HTML
 label.wrap = Wrap
 label.show_database_refs = Show Database Refs
@@ -1402,6 +1418,8 @@ label.click_to_edit = Click to edit, right-click for menu
 label.by_annotation_tooltip = Annotation Colour is configured from the main Colour menu
 label.show_linked_features = Show {0} features
 label.on_top = on top
+label.include_features = Include Features
+label.search_features = Search descriptions of displayed features
 label.include_linked_features = Include {0} features
 label.include_linked_tooltip = Include visible {0} features<br>converted to local sequence coordinates
 label.features_not_shown = {0} feature(s) not shown
@@ -1410,6 +1428,7 @@ label.ignore_hidden = Ignore hidden columns
 label.ignore_hidden_tooltip = Ignore any characters in hidden columns when matching
 label.log_level = Log level
 label.log_level_tooltip = Temporarily set the log level for this console. The log level will revert to {0} when this Java console is closed.
+label.copy = Copy
 label.copy_to_clipboard = Copy to clipboard
 label.copy_to_clipboard_tooltip = Copy all of the log text in this console to the system clipboard
 label.startup = Startup
@@ -1425,3 +1444,12 @@ label.memory_example_text = Maximum memory that would be used with these setting
 label.memory_example_tooltip = The memory allocated to Jalview is the smaller of the percentage of physical memory (default 90%) and the maximum absolute memory (default 32GB). If your computer's memory cannot be ascertained then the maximum absolute memory defaults to 8GB (if not customised).<br>Jalview will always try and reserve 512MB for the OS and at least 512MB for itself.
 warning.wrong_jvm_version_title = Wrong Java Version
 warning.wrong_jvm_version_message = The Java version being used (Java {0}) may lead to problems.\nThis installation of Jalview should be used with Java {1}.
+label.alphafold_reliability = Alphafold Reliability
+label.tftype_default = Default
+label.tftype_plddt = pLDDT
+label.optional = (optional)
+label.choose_tempfac_type = Choose Temperature Factor type
+label.interpret_tempfac_as = Interpret Temperature Factor as
+label.add_pae_matrix_file = Add PAE matrix file
+label.nothing_selected = Nothing selected
+label.working_ellipsis = Working ... 
\ No newline at end of file