X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=resources%2Flang%2FMessages.properties;h=511e5e926ce017171e785e801e147c382e89c6a3;hb=4167762603a83df3e00713307e6522bb027bdd59;hp=a2db06dc5c8320419bd4c078cfee530d871e51dc;hpb=3e0101470a0b6d41eac74c129f963a6ed0e69e2f;p=jalview.git
diff --git a/resources/lang/Messages.properties b/resources/lang/Messages.properties
index a2db06d..511e5e9 100644
--- a/resources/lang/Messages.properties
+++ b/resources/lang/Messages.properties
@@ -248,6 +248,9 @@ label.use_rnaview = Use RNAView for secondary structure
label.autoadd_secstr = Add secondary structure annotation to alignment
label.autoadd_temp = Add Temperature Factor annotation to alignment
label.structure_viewer = Default structure viewer
+label.chimera_path = Path to Chimera program
+label.chimera_path_tip = Jalview will try standard locations, plus any path entered here.
+label.invalid_path = File not found or not executable
label.min_colour = Minimum Colour
label.max_colour = Maximum Colour
label.use_original_colours = Use Original Colours
@@ -383,7 +386,7 @@ label.pdb_entry_is_already_displayed = {0} is already displayed.\nDo you want to
label.map_sequences_to_visible_window = Map Sequences to Visible Window: {0}
label.add_pdbentry_to_view = Do you want to add {0} to the view called\n{1}\n
label.align_to_existing_structure_view = Align to existing structure view
-label.pdb_entries_couldnt_be_retrieved = The following pdb entries could not be retrieved from the PDB\:\n{0}\nPlease try downloading them manually.
+label.pdb_entries_couldnt_be_retrieved = The following pdb entries could not be retrieved from the PDB\:\n{0}\nPlease retry, or try downloading them manually.
label.couldnt_load_file = Couldn't load file
label.couldnt_find_pdb_id_in_file = Couldn't find a PDB id in the file supplied. Please enter an Id to identify this structure.
label.no_pdb_id_in_file = No PDB Id in File
@@ -485,6 +488,10 @@ label.edit_sequence = Edit Sequence
label.edit_sequences = Edit Sequences
label.sequence_details = Sequence Details
label.jmol_help = Jmol Help
+label.chimera_help = Chimera Help
+label.close_viewer = Close Viewer
+label.confirm_close_chimera = This will close Jalview''s connection to {0}.
Do you want to close the Chimera window as well?
+label.chimera_help = Chimera Help
label.all = All
label.sort_by = Sort alignment by
label.sort_by_score = Sort by Score
@@ -512,7 +519,7 @@ label.toggle_absolute_relative_display_threshold = Toggle between absolute and r
label.display_features_same_type_different_label_using_different_colour = Display features of the same type with a different label using a different colour. (e.g. domain features)
label.select_colour_minimum_value = Select Colour for Minimum Value
label.select_colour_maximum_value = Select Colour for Maximum Value
-label.open_new_jmol_view_with_all_structures_associated_current_selection_superimpose_using_alignment = Open a new Jmol view with all structures associated with the current selection and superimpose them using the alignment.
+label.open_new_jmol_view_with_all_structures_associated_current_selection_superimpose_using_alignment = Open a new structure viewer with all structures associated with the current selection and superimpose them using the alignment.
label.open_url_param = Open URL {0}
label.open_url_seqs_param = Open URL ({0}..) ({1} seqs)
label.load_pdb_file_associate_with_sequence = Load a PDB file and associate it with sequence {0}
@@ -601,6 +608,7 @@ label.das_settings = DAS Settings
label.web_services = Web Services
label.right_click_to_edit_currently_selected_parameter = Right click to edit currently selected parameter.
label.let_jmol_manage_structure_colours = Let Jmol manage structure colours
+label.let_chimera_manage_structure_colours = Let Chimera manage structure colours
label.marks_leaves_tree_not_associated_with_sequence = Marks leaves of tree not associated with a sequence
label.index_web_services_menu_by_host_site = Index web services in menu by the host site
label.option_want_informed_web_service_URL_cannot_be_accessed_jalview_when_starts_up = Check this option if you want to be informed
when a web service URL cannot be accessed by Jalview
when it starts up
@@ -649,7 +657,7 @@ label.edit_name_and_description_current_group = Edit name and description of cur
label.view_structure_for = View structure for {0}
label.view_all_structures = View all {0} structures.
label.view_all_representative_structures = View all {0} representative structures.
-label.open_new_jmol_view_with_all_representative_structures_associated_current_selection_superimpose_using_alignment = Opens a new Jmol view with all representative structures\nassociated with the current selection\nsuperimposed with the current alignment.
+label.open_new_jmol_view_with_all_representative_structures_associated_current_selection_superimpose_using_alignment = Opens a new structure viewer with all representative structures\nassociated with the current selection\nsuperimposed with the current alignment.
label.associate_structure_with_sequence = Associate Structure with Sequence
label.from_file = from file
label.enter_pdb_id = Enter PDB Id
@@ -695,8 +703,10 @@ label.jalview_pca_calculation = Jalview PCA Calculation
label.link_name = Link Name
label.pdb_file = PDB file
label.colour_with_jmol = Colour with Jmol
+label.colour_with_chimera = Colour with Chimera
label.align_structures = Align structures
label.jmol = Jmol
+label.chimera = Chimera
label.sort_alignment_by_tree = Sort Alignment By Tree
label.mark_unlinked_leaves = Mark Unlinked Leaves
label.associate_leaves_with = Associate Leaves With
@@ -836,7 +846,7 @@ label.service_url = Service URL
label.copied_sequences = Copied sequences
label.cut_sequences = Cut Sequences
label.conservation_colour_increment = Conservation Colour Increment ({0})
-label.percentage_identity_thereshold = Percentage Identity Thereshold ({0})
+label.percentage_identity_thereshold = Percentage Identity Threshold ({0})
label.error_unsupported_owwner_user_colour_scheme = Unsupported owner for User Colour scheme dialog
label.save_alignment_to_file = Save Alignment to file
label.save_features_to_file = Save Features to File
@@ -1141,7 +1151,7 @@ label.edit_jabaws_url = Edit JABAWS URL
label.add_jabaws_url = Add new JABAWS URL
label.news_from_jalview = News from http://www.jalview.org
label.cut_paste_alignmen_file = Cut & Paste Alignment File
-label.enter_redundancy_thereshold = Enter the redundancy thereshold
+label.enter_redundancy_thereshold = Enter the redundancy threshold
label.select_dark_light_set_thereshold = Select a dark and light text colour, then set the threshold to
switch between colours, based on background colour
label.select_feature_colour = Select Feature Colour
label.delete_all = Delete all sequences