X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=resources%2Flang%2FMessages.properties;h=ce39010fa0589dc398d1b11751f3adadabba3324;hb=5965127c38ff1a35d10d806c4b4537cdc1e39579;hp=864e34aa614fa3fa5f4b8691a03b6df9415fdcee;hpb=f269ceeb37293f592c4916dd91cff9c4fdd3f874;p=jalview.git

diff --git a/resources/lang/Messages.properties b/resources/lang/Messages.properties
index 864e34a..ce39010 100644
--- a/resources/lang/Messages.properties
+++ b/resources/lang/Messages.properties
@@ -125,6 +125,8 @@ action.change_font_tree_panel = Change Font (Tree Panel)
 action.colour = Colour
 action.calculate = Calculate
 action.select_all = Select all
+action.select_highlighted_columns = Select Highlighted Columns
+tooltip.select_highlighted_columns = Press B to mark highlighted columns, Ctrl-(or Cmd)-B to toggle, and Alt-B to mark all but highlighted columns 
 action.deselect_all = Deselect all
 action.invert_selection = Invert selection
 action.using_jmol = Using Jmol
@@ -714,6 +716,8 @@ label.colour_with_chimera = Colour with Chimera
 label.align_structures = Align Structures
 label.jmol = Jmol
 label.chimera = Chimera
+label.create_chimera_attributes = Write Jalview features
+label.create_chimera_attributes_tip = Set Chimera residue attributes for visible features
 label.sort_alignment_by_tree = Sort Alignment By Tree
 label.mark_unlinked_leaves = Mark Unlinked Leaves
 label.associate_leaves_with = Associate Leaves With
@@ -787,9 +791,9 @@ label.hide_columns_containing = Hide columns containing
 label.hide_columns_not_containing = Hide columns that do not contain
 option.trim_retrieved_seqs = Trim retrieved sequences
 label.trim_retrieved_sequences = When the reference sequence is longer than the sequence that you are working with, only keep the relevant subsequences.
-label.use_sequence_id_1 = Use $SEQUENCE_ID$ or $SEQUENCE_ID=/<regex>/=$
-label.use_sequence_id_2 = to embed sequence id in URL
-label.use_sequence_id_3 = Use $SEQUENCE_NAME$ similarly to embed sequence name
+label.use_sequence_id_1 = Use $DB_ACCESSION$ or $DB_ACCESSION=/<regex>/=$
+label.use_sequence_id_2 = to embed accession id in URL
+label.use_sequence_id_3 = Use $SEQUENCE_ID$ similarly to embed sequence id
 label.use_sequence_id_4 = 
 label.ws_parameters_for = Parameters for {0}
 label.switch_server = Switch server
@@ -1144,7 +1148,7 @@ warn.user_defined_width_requirements = The user defined width for the\nannotatio
 label.couldnt_create_sequence_fetcher = Couldn't create SequenceFetcher
 warn.couldnt_create_sequence_fetcher_client = Could not create the sequence fetcher client. Check error logs for details.
 warn.server_didnt_pass_validation = Service did not pass validation.\nCheck the Jalview Console for more details.
-warn.url_must_contain = Sequence URL must contain $SEQUENCE_ID$ or a regex $SEQUENCE_ID=/<regex>/=$
+warn.url_must_contain = Sequence URL must contain $SEQUENCE_ID$, $DB_ACCESSION$, or a regex
 warn.urls_not_contacted = URLs that could not be contacted
 warn.urls_no_jaba = URLs without any JABA Services
 info.validate_jabaws_server = Validate JabaWS Server ?\n(Look in console output for results)
@@ -1268,3 +1272,8 @@ status.exporting_alignment_as_x_file = Exporting alignment as {0} file
 label.column = Column
 label.cant_map_cds = Unable to map CDS to protein\nCDS missing or incomplete
 label.operation_failed = Operation failed
+label.SEQUENCE_ID_no_longer_used = $SEQUENCE_ID$ is no longer used for DB accessions
+label.SEQUENCE_ID_for_DB_ACCESSION1 = Please review your URL links in the 'Connections' tab of the Preferences window:
+label.SEQUENCE_ID_for_DB_ACCESSION2 = URL links using '$SEQUENCE_ID$' for DB accessions now use '$DB_ACCESSION$'.
+label.do_not_display_again = Do not display this message again
+label.output_seq_details = Output Sequence Details to list all database references