X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=resources%2Flang%2FMessages.properties;h=d5676991ecd6092e260709f9a4c12e2fd49f7465;hb=c437fc72420baf7b045d417fb6cabcebe87987c5;hp=55d7a904c9f9fa0c9336424b2ebad56ab3bc12c7;hpb=02615f4ca92570e571d166aeb8d9c0bf6531424d;p=jalview.git diff --git a/resources/lang/Messages.properties b/resources/lang/Messages.properties index 55d7a90..d567699 100644 --- a/resources/lang/Messages.properties +++ b/resources/lang/Messages.properties @@ -6,7 +6,7 @@ action.save_scheme = Save scheme action.save_image = Save Image action.paste = Paste action.show_html_source = Show HTML Source -action.print = Print +action.print = Print... action.web_service = Web Service action.cancel_job = Cancel Job action.start_job = Start Job @@ -30,7 +30,7 @@ action.save_project = Save Project action.quit = Quit action.expand_views = Expand Views action.gather_views = Gather Views -action.page_setup = Page Setup +action.page_setup = Page Setup... action.reload = Reload action.load = Load action.open = Open @@ -38,7 +38,6 @@ action.cancel = Cancel action.create = Create action.update = Update action.delete = Delete -action.snapshot = Snapshot action.clear = Clear action.accept = Accept action.select_ddbb = --- Select Database --- @@ -53,16 +52,15 @@ action.left_justify_alignment = Left Justify Alignment action.right_justify_alignment = Right Justify Alignment action.boxes = Boxes action.text = Text -action.by_pairwise_id = by Pairwise Identity -action.by_id = by Id -action.by_length = by Length -action.by_group = by Group +action.by_pairwise_id = By Pairwise Identity +action.by_id = By Id +action.by_length = By Length +action.by_group = By Group action.unmark_as_reference = Unmark as Reference action.set_as_reference = Set as Reference action.remove = Remove action.remove_redundancy = Remove Redundancy... -action.pairwise_alignment = Pairwise Alignments... -action.by_rna_helixes = by RNA Helices +action.pairwise_alignment = Pairwise Alignment action.user_defined = User Defined... action.by_conservation = By Conservation action.wrap = Wrap @@ -70,7 +68,6 @@ action.show_gaps = Show Gaps action.show_hidden_markers = Show Hidden Markers action.find = Find action.undefine_groups = Undefine Groups -action.create_groups = Create Groups action.make_groups_selection = Make Groups For Selection action.copy = Copy action.cut = Cut @@ -82,7 +79,7 @@ action.by_tree_order = By Tree Order action.sort = Sort action.calculate_tree = Calculate Tree action.help = Help -action.by_annotation = by Annotation... +action.by_annotation = By Annotation... action.invert_sequence_selection = Invert Sequence Selection action.invert_column_selection = Invert Column Selection action.show = Show @@ -118,15 +115,16 @@ action.new_view = New View action.close = Close action.add = Add action.save_as_default = Save as default -action.save_as = Save as +action.save_as = Save as... action.save = Save action.cancel_fetch = Cancel Fetch -action.save_omit_hidden_columns = Save / Omit Hidden Regions action.change_font = Change Font action.change_font_tree_panel = Change Font (Tree Panel) action.colour = Colour action.calculate = Calculate action.select_all = Select all +action.select_highlighted_columns = Select Highlighted Columns +tooltip.select_highlighted_columns = Press B to mark highlighted columns, Ctrl-(or Cmd)-B to toggle, and Alt-B to mark all but highlighted columns action.deselect_all = Deselect all action.invert_selection = Invert selection action.using_jmol = Using Jmol @@ -137,21 +135,23 @@ action.show_group = Show Group action.fetch_db_references = Fetch DB References action.view_flanking_regions = Show flanking regions label.view_flanking_regions = Show sequence data either side of the subsequences involved in this alignment -label.str = Str: -label.seq = Seq: label.structures_manager = Structures Manager label.nickname = Nickname: -label.url = URL: +label.url = URL +label.url\: = URL: label.input_file_url = Enter URL or Input File -label.select_feature = Select feature: +label.select_feature = Select feature label.name = Name +label.name\: = Name: label.name_param = Name: {0} label.group = Group +label.group\: = Group: label.group_name = Group Name label.group_description = Group Description label.edit_group_name_description = Edit Group Name/Description label.colour = Colour: -label.description = Description: +label.description = Description +label.description\: = Description: label.start = Start: label.end = End: label.current_parameter_set_name = Current parameter set name: @@ -178,27 +178,30 @@ label.score_model_conservation = Physicochemical property conservation label.score_model_enhconservation = Physicochemical property conservation label.status_bar = Status bar label.out_to_textbox = Output to Textbox -label.clustalx = Clustalx +# delete Clustal - use FileFormat name instead label.clustal = Clustal -label.zappo = Zappo -label.taylor = Taylor +# label.colourScheme_ as in JalviewColourScheme +label.colourScheme_clustal = Clustalx +label.colourScheme_blosum62 = BLOSUM62 Score +label.colourScheme_%_identity = Percentage Identity +label.colourScheme_zappo = Zappo +label.colourScheme_taylor = Taylor +label.colourScheme_hydrophobic = Hydrophobicity +label.colourScheme_helix_propensity = Helix Propensity +label.colourScheme_strand_propensity = Strand Propensity +label.colourScheme_turn_propensity = Turn Propensity +label.colourScheme_buried_index = Buried Index +label.colourScheme_purine/pyrimidine = Purine/Pyrimidine +label.colourScheme_nucleotide = Nucleotide +label.colourScheme_t-coffee_scores = T-Coffee Scores +label.colourScheme_rna_helices = By RNA Helices label.blc = BLC label.fasta = Fasta label.msf = MSF label.pfam = PFAM label.pileup = Pileup label.pir = PIR -label.hydrophobicity = Hydrophobicity -label.helix_propensity = Helix Propensity -label.strand_propensity = Strand Propensity -label.turn_propensity = Turn Propensity -label.buried_index = Buried Index -label.purine_pyrimidine = Purine/Pyrimidine -label.percentage_identity = Percentage Identity -label.blosum62 = BLOSUM62 -label.blosum62_score = BLOSUM62 Score -label.tcoffee_scores = T-Coffee Scores -label.average_distance_bloslum62 = Average Distance Using BLOSUM62 +label.average_distance_blosum62 = Average Distance Using BLOSUM62 label.neighbour_blosum62 = Neighbour Joining Using BLOSUM62 label.show_annotations = Show annotations label.hide_annotations = Hide annotations @@ -210,25 +213,28 @@ label.hide_all = Hide all label.add_reference_annotations = Add reference annotations label.find_tip = Search alignment, selection or sequence ids for a subsequence (ignoring gaps).
Accepts regular expressions - search Help for 'regex' for details. label.colour_text = Colour Text -label.show_non_conversed = Show nonconserved +label.show_non_conserved = Show nonconserved label.overview_window = Overview Window label.none = None label.above_identity_threshold = Above Identity Threshold label.show_sequence_features = Show Sequence Features label.nucleotide = Nucleotide label.protein = Protein +label.nucleotides = Nucleotides +label.proteins = Proteins label.to_new_alignment = To New Alignment label.to_this_alignment = Add To This Alignment label.apply_colour_to_all_groups = Apply Colour To All Groups -label.modify_identity_thereshold = Modify Identity Threshold... -label.modify_conservation_thereshold = Modify Conservation Threshold... +label.modify_identity_threshold = Modify Identity Threshold... +label.modify_conservation_threshold = Modify Conservation Threshold... label.input_from_textbox = Input from textbox label.centre_column_labels = Centre column labels label.automatic_scrolling = Automatic Scrolling label.documentation = Documentation label.about = About... label.show_sequence_limits = Show Sequence Limits -label.feature_settings = Feature Settings... +action.feature_settings = Feature Settings... +label.feature_settings = Feature Settings label.all_columns = All Columns label.all_sequences = All Sequences label.selected_columns = Selected Columns @@ -237,7 +243,6 @@ label.except_selected_sequences = All except selected sequences label.all_but_selected_region = All but Selected Region (Shift+Ctrl+H) label.selected_region = Selected Region label.all_sequences_columns = All Sequences and Columns -label.hide_insertions = Hide columns gapped for selection label.hide_selected_annotations = Hide selected annotations label.show_selected_annotations = Show selected annotations label.group_consensus = Group Consensus @@ -318,10 +323,9 @@ label.found_match_for = Found match for {0} label.font = Font: label.size = Size: label.style = Style: -label.enter_redundancy_threshold = Enter the redundancy threshold label.calculating = Calculating.... label.modify_conservation_visibility = Modify conservation visibility -label.colour_residues_above_occurence = Colour residues above % occurence +label.colour_residues_above_occurrence = Colour residues above % occurrence label.set_this_label_text = set this label text label.sequences_from = Sequences from {0} label.successfully_loaded_file = Successfully loaded file {0} @@ -342,8 +346,8 @@ label.blog_item_published_on_date = {0} {1} label.select_das_service_from_table = Select a DAS service from the table to read a full description here. label.session_update = Session Update label.new_vamsas_session = New Vamsas Session -label.load_vamsas_session = Load Vamsas Session -label.save_vamsas_session = Save Vamsas Session +action.load_vamsas_session = Load Vamsas Session... +action.save_vamsas_session = Save Vamsas Session label.select_vamsas_session_opened_as_new_vamsas_session= Select a vamsas session to be opened as a new vamsas session. label.open_saved_vamsas_session = Open a saved VAMSAS session label.groovy_console = Groovy Console... @@ -362,7 +366,6 @@ label.example = Example label.example_param = Example: {0} label.select_file_format_before_saving = You must select a file format before saving! label.file_format_not_specified = File format not specified -label.alignment_contains_hidden_columns = The Alignment contains hidden regions (hidden sequences/columns).\nDo you want to save only the visible alignment? label.couldnt_save_file = Couldn't save file: {0} label.error_saving_file = Error Saving File label.remove_from_default_list = Remove from default list? @@ -383,14 +386,14 @@ label.select_at_least_three_bases_in_at_least_one_sequence_to_cDNA_translation = label.translation_failed = Translation Failed label.error_when_translating_sequences_submit_bug_report = Unfortunately, something went wrong when translating your sequences.\nPlease take a look in the Jalview java console\nand submit a bug report including the stacktrace. label.implementation_error = Implementation error: -label.automatically_associate_pdb_files_with_sequences_same_name = Do you want to automatically associate the {0} PDB files with sequences in the alignment that have the same name? -label.automatically_associate_pdb_files_by_name = Automatically Associate PDB files by name +label.automatically_associate_structure_files_with_sequences_same_name = Do you want to automatically associate the {0} structure file(s) with sequences in the alignment that have the same name? +label.automatically_associate_structure_files_by_name = Automatically Associate Structure files by name label.ignore_unmatched_dropped_files_info = Do you want to ignore the {0} files whose names did not match any sequence IDs ? label.ignore_unmatched_dropped_files = Ignore unmatched dropped files? label.view_name_original = Original label.enter_view_name = Enter View Name label.enter_label = Enter label -label.enter_label_for_the_structure = Enter a label for the structure? +label.enter_label_for_the_structure = Enter a label for the structure label.pdb_entry_is_already_displayed = {0} is already displayed.\nDo you want to re-use this viewer ? label.map_sequences_to_visible_window = Map Sequences to Visible Window: {0} label.add_pdbentry_to_view = Do you want to add {0} to the view called\n{1}\n @@ -410,7 +413,6 @@ label.couldnt_import_as_vamsas_session = Couldn't import {0} as a new vamsas ses label.vamsas_document_import_failed = Vamsas Document Import Failed label.couldnt_locate = Couldn't locate {0} label.url_not_found = URL not found -label.no_link_selected = No link selected label.new_sequence_url_link = New sequence URL link label.cannot_edit_annotations_in_wrapped_view = Cannot edit annotations in wrapped view label.wrapped_view_no_edit = Wrapped view - no edit @@ -464,7 +466,6 @@ label.no_features_added_to_this_alignment = No Features added to this alignment! label.features_can_be_added_from_searches_1 = (Features can be added from searches or label.features_can_be_added_from_searches_2 = from Jalview / GFF features files) label.calculating_pca= Calculating PCA -label.reveal_columns = Reveal Columns label.jalview_cannot_open_file = Jalview can't open file label.jalview_applet = Jalview applet label.loading_data = Loading data @@ -472,7 +473,6 @@ label.memory_stats = Total Free Memory: {0} MB; Max Memory: {1} MB; {2} % label.calculating_tree = Calculating tree label.state_queueing = queuing label.state_running = running -label.state_complete = complete label.state_completed = finished label.state_job_cancelled = job cancelled!! label.state_job_error = job error! @@ -482,15 +482,15 @@ label.fetching_pdb_data = Fetching PDB data... label.structure_type = Structure type label.settings_for_type = Settings for {0} label.view_full_application = View in Full Application -label.load_associated_tree = Load Associated Tree ... -label.load_features_annotations = Load Features/Annotations ... -label.export_features = Export Features ... -label.export_annotations = Export Annotations ... +label.load_associated_tree = Load Associated Tree... +label.load_features_annotations = Load Features/Annotations... +label.export_features = Export Features... +label.export_annotations = Export Annotations... label.to_upper_case = To Upper Case label.to_lower_case = To Lower Case label.toggle_case = Toggle Case -label.edit_name_description = Edit Name/Description ... -label.create_sequence_feature = Create Sequence Feature ... +label.edit_name_description = Edit Name/Description... +label.create_sequence_feature = Create Sequence Feature... label.edit_sequence = Edit Sequence label.edit_sequences = Edit Sequences label.sequence_details = Sequence Details @@ -498,7 +498,6 @@ label.jmol_help = Jmol Help label.chimera_help = Chimera Help label.close_viewer = Close Viewer label.confirm_close_chimera = This will close Jalview''s connection to {0}.
Do you want to close the Chimera window as well? -label.chimera_help = Chimera Help label.all = All label.sort_by = Sort alignment by label.sort_by_score = Sort by Score @@ -515,18 +514,17 @@ label.retrieve_parse_sequence_database_records_alignment_or_selected_sequences = label.standard_databases = Standard Databases label.fetch_embl_uniprot = Fetch from EMBL/EMBLCDS or Uniprot/PDB and any selected DAS sources label.reset_min_max_colours_to_defaults = Reset min and max colours to defaults from user preferences. -label.align_structures_using_linked_alignment_views = Align structures using {0} linked alignment views +label.align_structures_using_linked_alignment_views = Superpose structures using {0} selected alignment view(s) label.connect_to_session = Connect to session {0} label.threshold_feature_display_by_score = Threshold the feature display by score. -label.threshold_feature_no_thereshold = No Threshold -label.threshold_feature_above_thereshold = Above Threshold -label.threshold_feature_below_thereshold = Below Threshold -label.adjust_thereshold = Adjust threshold +label.threshold_feature_no_threshold = No Threshold +label.threshold_feature_above_threshold = Above Threshold +label.threshold_feature_below_threshold = Below Threshold +label.adjust_threshold = Adjust threshold label.toggle_absolute_relative_display_threshold = Toggle between absolute and relative display threshold. label.display_features_same_type_different_label_using_different_colour = Display features of the same type with a different label using a different colour. (e.g. domain features) label.select_colour_minimum_value = Select Colour for Minimum Value label.select_colour_maximum_value = Select Colour for Maximum Value -label.open_new_jmol_view_with_all_structures_associated_current_selection_superimpose_using_alignment = Open a new structure viewer with all structures associated with the current selection and superimpose them using the alignment. label.open_url_param = Open URL {0} label.open_url_seqs_param = Open URL ({0}..) ({1} seqs) label.load_pdb_file_associate_with_sequence = Load a PDB file and associate it with sequence {0} @@ -562,7 +560,8 @@ label.from_textbox = from Textbox label.window = Window label.preferences = Preferences label.tools = Tools -label.fetch_sequences = Fetch Sequence(s) +label.fetch_sequences = Fetch Sequences +action.fetch_sequences = Fetch Sequences... label.stop_vamsas_session = Stop Vamsas Session label.collect_garbage = Collect Garbage label.show_memory_usage = Show Memory Usage @@ -580,8 +579,8 @@ label.histogram = Histogram label.logo = Logo label.non_positional_features = List Non-positional Features label.database_references = List Database References -label.share_selection_across_views = Share selection across views -label.scroll_highlighted_regions = Scroll to highlighted regions +#label.share_selection_across_views = Share selection across views +#label.scroll_highlighted_regions = Scroll to highlighted regions label.gap_symbol = Gap Symbol label.prot_alignment_colour = Protein Alignment Colour label.nuc_alignment_colour = Nucleotide Alignment Colour @@ -620,6 +619,8 @@ label.web_services = Web Services label.right_click_to_edit_currently_selected_parameter = Right click to edit currently selected parameter. label.let_jmol_manage_structure_colours = Let Jmol manage structure colours label.let_chimera_manage_structure_colours = Let Chimera manage structure colours +label.fetch_chimera_attributes = Fetch Chimera attributes +label.fetch_chimera_attributes_tip = Copy Chimera attribute to Jalview feature label.marks_leaves_tree_not_associated_with_sequence = Marks leaves of tree not associated with a sequence label.index_web_services_menu_by_host_site = Index web services in menu by the host site label.option_want_informed_web_service_URL_cannot_be_accessed_jalview_when_starts_up = Check this option if you want to be informed
when a web service URL cannot be accessed by Jalview
when it starts up @@ -664,23 +665,14 @@ label.cut_paste = Cut'n'Paste label.adjusting_parameters_for_calculation = Adjusting parameters for existing Calculation label.2d_rna_structure_line = 2D RNA {0} (alignment) label.2d_rna_sequence_name = 2D RNA - {0} -label.edit_name_and_description_current_group = Edit name and description of current group. -label.view_structure_for = View structure for {0} -label.view_all_structures = View all {0} structures. -label.view_all_representative_structures = View all {0} representative structures. -label.open_new_jmol_view_with_all_representative_structures_associated_current_selection_superimpose_using_alignment = Opens a new structure viewer with all representative structures\nassociated with the current selection\nsuperimposed with the current alignment. -label.associate_structure_with_sequence = Associate Structure with Sequence -label.from_file = from file -label.enter_pdb_id = Enter PDB Id -label.discover_pdb_ids = Discover PDB ids +label.edit_name_and_description_current_group = Edit name and description of current group +label.from_file = From File +label.enter_pdb_id = Enter PDB Id (or pdbid:chaincode) label.text_colour = Text Colour +action.set_text_colour = Text Colour... label.structure = Structure -label.view_structure = View Structure -label.view_protein_structure = View Protein Structure -label.show_pdbstruct_dialog = 3D Structure Data ... +label.show_pdbstruct_dialog = 3D Structure Data... label.view_rna_structure = VARNA 2D Structure -label.clustalx_colours = Clustalx colours -label.above_identity_percentage = Above % Identity label.create_sequence_details_report_annotation_for = Annotation for {0} label.sequence_details_for = Sequence Details for {0} label.sequence_name = Sequence Name @@ -701,8 +693,9 @@ label.load_tree_for_sequence_set = Load a tree for this sequence set label.export_image = Export Image label.vamsas_store = VAMSAS store label.translate_cDNA = Translate as cDNA -label.linked_view_title = Linked cDNA and protein view -label.align = Align +label.reverse = Reverse +label.reverse_complement = Reverse Complement +label.linked_view_title = Linked CDS and protein view label.extract_scores = Extract Scores label.get_cross_refs = Get Cross-References label.sort_alignment_new_tree = Sort Alignment With New Tree @@ -714,39 +707,53 @@ label.use_registry = Use Registry label.add_local_source = Add Local Source label.set_as_default = Set as Default label.show_labels = Show labels -label.background_colour = Background Colour +action.background_colour = Background Colour... label.associate_nodes_with = Associate Nodes With label.jalview_pca_calculation = Jalview PCA Calculation label.link_name = Link Name label.pdb_file = PDB file label.colour_with_jmol = Colour with Jmol label.colour_with_chimera = Colour with Chimera -label.align_structures = Align structures +label.superpose_structures = Superpose Structures +error.superposition_failed = Superposition failed: {0} +label.insufficient_residues = Not enough aligned residues ({0}) to perform superposition label.jmol = Jmol label.chimera = Chimera +label.create_chimera_attributes = Write Jalview features +label.create_chimera_attributes_tip = Set Chimera residue attributes for visible features +label.attributes_set = {0} attribute values set on Chimera label.sort_alignment_by_tree = Sort Alignment By Tree label.mark_unlinked_leaves = Mark Unlinked Leaves label.associate_leaves_with = Associate Leaves With label.save_colour_scheme_with_unique_name_added_to_colour_menu = Save your colour scheme with a unique name and it will be added to the Colour menu label.case_sensitive = Case Sensitive -label.lower_case_colour = Lower Case Colour -label.index_by_host = Index by host -label.index_by_type = Index by type +label.lower_case_colour = Colour All Lower Case +label.lower_case_tip = Chosen colour applies to all lower case symbols +label.index_by_host = Index by Host +label.index_by_type = Index by Type label.enable_jabaws_services = Enable JABAWS Services -label.display_warnings = Display warnings -label.move_url_up = Move URL up -label.move_url_down = Move URL down -label.add_sbrs_definition = Add a SBRS definition -label.edit_sbrs_definition = Edit SBRS definition -label.delete_sbrs_definition = Delete SBRS definition -label.your_sequences_have_been_verified = Your sequences have been verified against known sequence databases. Some of the ids have been\n altered, most likely the start/end residue will have been updated.\n Save your alignment to maintain the updated id.\n\n -label.sequence_names_updated = Sequence names updated +label.display_warnings = Display Warnings +label.move_url_up = Move URL Up +label.move_url_down = Move URL Down +label.add_sbrs_definition = Add a SBRS Definition +label.edit_sbrs_definition = Edit SBRS Definition +label.delete_sbrs_definition = Delete SBRS Definition +label.your_sequences_have_been_verified = Your sequences have been verified against known sequence databases.\n(Use Calculate | Show flanking regions to show enclosing sequence.)\nTo preserve data changes, save your alignment.\n\n +label.sequences_updated = Sequences updated label.dbref_search_completed = DBRef search completed label.show_all_chains = Show all chains label.fetch_all_param = Fetch all {0} label.paste_new_window = Paste To New Window label.settings_for_param = Settings for {0} label.view_params = View {0} +label.aacon_calculations = AACon Calculations +label.aacon_settings = Change AACon Settings... +tooltip.aacon_calculations = When checked, AACon calculations are updated automatically. +tooltip.aacon_settings = Modify settings for AACon calculations. +label.rnalifold_calculations = RNAAliFold Prediction +label.rnalifold_settings = Change RNAAliFold settings... +tooltip.rnalifold_calculations = When checked, RNA secondary structure predictions will be calculated for the alignment, and updated when edits are made. +tooltip.rnalifold_settings = Modify settings for the RNAAliFold prediction. Use this to hide or show different results of the RNA calculation, and change RNA folding parameters. label.all_views = All Views label.align_sequences_to_existing_alignment = Align sequences to an existing alignment label.realign_with_params = Realign with {0} @@ -770,11 +777,11 @@ label.original_data_for_params = Original Data for {0} label.points_for_params = Points for {0} label.transformed_points_for_params = Transformed points for {0} label.graduated_color_for_params = Graduated Feature Colour for {0} -label.select_backgroud_colour = Select Background Colour +label.select_background_colour = Select Background Colour label.invalid_font = Invalid Font -label.separate_multiple_accession_ids = Enter one or more PDB accession IDs separated by a semi-colon ";" +label.separate_multiple_accession_ids = Enter one or more accession IDs separated by a semi-colon ";" label.separate_multiple_query_values = Enter one or more {0}s separated by a semi-colon ";" -label.search_all = Enter one or more search values separated by a semi-colon ";" (Note: This Searches the entire PDB database) +label.search_all = Enter one or more search values separated by a semi-colon ";" (Note: This searches the entire database) label.replace_commas_semicolons = Replace commas with semi-colons label.parsing_failed_syntax_errors_shown_below_param = Parsing failed. Syntax errors shown below {0} label.parsing_failed_unrecoverable_exception_thrown_param = \nParsing failed. An unrecoverable exception was thrown\:\n {0} @@ -785,10 +792,14 @@ label.wswublast_client_credits = To display sequence features an exact Uniprot i label.blasting_for_unidentified_sequence = BLASTing for unidentified sequences label.select_columns_containing = Select columns containing label.select_columns_not_containing = Select columns that do not contain +label.hide_columns_containing = Hide columns containing +label.hide_columns_not_containing = Hide columns that do not contain option.trim_retrieved_seqs = Trim retrieved sequences label.trim_retrieved_sequences = When the reference sequence is longer than the sequence that you are working with, only keep the relevant subsequences. -label.use_sequence_id_1 = Use $SEQUENCE_ID$ or $SEQUENCE_ID=//=$ -label.use_sequence_id_2 = \nto embed sequence id in URL +label.use_sequence_id_1 = Use $DB_ACCESSION$ or $DB_ACCESSION=//=$ +label.use_sequence_id_2 = to embed accession id in URL +label.use_sequence_id_3 = Use $SEQUENCE_ID$ similarly to embed sequence id +label.use_sequence_id_4 = label.ws_parameters_for = Parameters for {0} label.switch_server = Switch server label.choose_jabaws_server = Choose a server for running this service @@ -796,7 +807,6 @@ label.services_at = Services at {0} label.rest_client_submit = {0} using {1} label.fetch_retrieve_from =Retrieve from {0} label.fetch_retrieve_from_all_sources = Retrieve from all {0} sources in {1}
First is :{2} -#label.feature_settings_click_drag = Click/drag feature types up or down to change render order.
Double click to select columns containing feature in alignment/current selection
Pressing Alt will select columns outside features rather than inside
Pressing Shift to modify current selection (rather than clear current selection)
Press CTRL or Command/Meta to toggle columns in/outside features
label.feature_settings_click_drag = Drag up or down to change render order.
Double click to select columns containing feature. label.transparency_tip = Adjust transparency to 'see through' feature colours. label.opt_and_params_further_details = see further details by right-clicking @@ -812,17 +822,10 @@ label.user_preset = User Preset label.service_preset = Service Preset label.run_with_preset = Run {0} with preset label.view_service_doc_url = View {1} -label.submit_sequence = Submit {0} {1} {2} {3} to
{4} -action.by_title_param = by {0} -label.alignment = Alignment -label.secondary_structure_prediction = Secondary Structure Prediction -label.sequence_database_search = Sequence Database Search -label.analysis = Analysis -label.protein_disorder = Protein Disorder +action.by_title_param = By {0} label.source_from_db_source = Sources from {0} label.from_msname = from {0} -label.superpose_with = Superpose with ... -action.do = Do +label.superpose_with = Superpose with label.scale_label_to_column = Scale Label to Column label.add_new_row = Add New Row label.edit_label_description = Edit Label/Description @@ -839,7 +842,7 @@ label.colour_by = Colour by... label.muscle_multiple_protein_sequence_alignment = Muscle Multiple Protein Sequence Alignment label.mafft_multiple_sequence_alignment = MAFFT Multiple Sequence Alignment label.clustalw_multiple_sequence_alignment = ClustalW Multiple Sequence Alignment -label.jnet_secondary_structure_prediction = JNet Secondary Structure Prediction +label.jnet_secondary_structure_prediction = JPred Secondary Structure Prediction label.multiharmony = Multi-Harmony label.unable_start_web_service_analysis = Unable to start web service analysis label.job_couldnt_be_started_check_input = The Job couldn't be started. Please check your input, and the Jalview console for any warning messages. @@ -866,7 +869,7 @@ label.service_url = Service URL label.copied_sequences = Copied sequences label.cut_sequences = Cut Sequences label.conservation_colour_increment = Conservation Colour Increment ({0}) -label.percentage_identity_thereshold = Percentage Identity Threshold ({0}) +label.percentage_identity_threshold = Percentage Identity Threshold ({0}) label.error_unsupported_owwner_user_colour_scheme = Unsupported owner for User Colour scheme dialog label.save_alignment_to_file = Save Alignment to file label.save_features_to_file = Save Features to File @@ -882,7 +885,6 @@ label.save_vamsas_document_archive = Save Vamsas Document Archive label.saving_vamsas_doc = Saving VAMSAS Document to {0} label.load_feature_colours = Load Feature Colours label.save_feature_colours = Save Feature Colour Scheme -label.dataset_for = {0} Dataset for {1} label.select_startup_file = Select startup file label.select_default_browser = Select default web browser label.save_tree_as_newick = Save tree as newick file @@ -910,15 +912,9 @@ error.null_from_clone1 = Null from clone1! error.implementation_error_sortbyfeature = Implementation Error - sortByFeature method must be one of FEATURE_SCORE, FEATURE_LABEL or FEATURE_DENSITY. error.not_yet_implemented = Not yet implemented error.unknown_type_dna_or_pep = Unknown Type {0} - dna or pep are the only allowed values. -error.implementation_error_dont_know_thereshold_annotationcolourgradient = Implementation error: don't know about threshold setting for current AnnotationColourGradient. -error.implementation_error_embeddedpopup_not_null = Implementation error - embeddedPopup must be non-null -error.invalid_colour_for_mycheckbox = Invalid color for MyCheckBox -error.implementation_error_unrecognised_render_object_for_features_type = Implementation Error: Unrecognised render object {0} for features of type {1} -error.implementation_error_unsupported_feature_colour_object = Implementation error: Unsupported feature colour object. +error.implementation_error_dont_know_threshold_annotationcolourgradient = Implementation error: don't know about threshold setting for current AnnotationColourGradient. error.invalid_separator_parameter = Invalid separator parameter - must be non-zero length error.alignment_cigararray_not_implemented = Alignment(CigarArray) not yet implemented -error.weak_sequencei_equivalence_not_yet_implemented = Weak sequenceI equivalence not yet implemented. -error.implementation_error_can_only_make_alignmnet_from_cigararray = Implementation Error - can only make an alignment view from a CigarArray of sequences. error.empty_view_cannot_be_updated = empty view cannot be updated. error.mismatch_between_number_of_sequences_in_block = Mismatch between number of sequences in block {0} ({1}) and the original view ({2}) error.padding_not_yet_implemented = Padding not yet implemented @@ -940,21 +936,18 @@ error.not_yet_implemented_cigar_object_from_cigar_string = NOT YET Implemented: error.implementation_bug_cigar_operation = Implementation Bug. Cigar Operation {0} {1} not one of {2}, {3}, or {4}. error.implementation_error_for_new_cigar = Implementation error for new Cigar(SequenceI) error.implementation_error_cigar_seq_no_operations = Implementation error: {0}th sequence Cigar has no operations. -error.implementation_error_jmol_getting_data = Implementation error - Jmol seems to be still working on getting its data - report at http://issues.jalview.org/browse/JAL-1016 error.implementation_error_no_pdbentry_from_index = Implementation error - no corresponding pdbentry (for index {0}) to add sequences mappings to error.jmol_version_not_compatible_with_jalview_version = Jmol version {0} is not compatible with this version of Jalview. Report this problem at issues.jalview.org error.not_implemented_remove = Remove: Not implemented error.not_implemented_clone = Clone: Not implemented -error.implementation_error_chimera_getting_data = Implementation error - Chimera seems to be still working on getting its data - report at http://issues.jalview.org/browse/JAL-1016 error.call_setprogressbar_before_registering_handler = call setProgressBar before registering the progress bar's handler. label.cancelled_params = Cancelled {0} error.implementation_error_cannot_show_view_alignment_frame = Implementation error: cannot show a view from another alignment in an AlignFrame. -error.implementation_error_dont_know_about_thereshold_setting = Implementation error: don't know about threshold setting for current AnnotationColourGradient. +error.implementation_error_dont_know_about_threshold_setting = Implementation error: don't know about threshold setting for current AnnotationColourGradient. error.eps_generation_not_implemented = EPS Generation not yet implemented error.png_generation_not_implemented = PNG Generation not yet implemented error.try_join_vamsas_session_another = Trying to join a vamsas session when another is already connected error.invalid_vamsas_session_id = Invalid vamsas session id -error.implementation_error_cannot_create_groovyshell = Implementation Error. Cannot create groovyShell without Groovy on the classpath! label.groovy_support_failed = Jalview Groovy Support Failed label.couldnt_create_groovy_shell = Couldn't create the groovy Shell. Check the error log for the details of what went wrong. error.unsupported_version_calcIdparam = Unsupported Version for calcIdparam {0} @@ -969,13 +962,11 @@ error.setstatus_called_non_existent_job_pane = setStatus called for non-existent error.implementation_error_cannot_find_marshaller_for_param_set =Implementation error: Can't find a marshaller for the parameter set error.implementation_error_old_jalview_object_not_bound =IMPLEMENTATION ERROR: old jalview object is not bound ! ({0}) error.implementation_error_vamsas_doc_class_should_bind_to_type = Implementation Error: Vamsas Document Class {0} should bind to a {1} (found a {2}) -error.implementation_error_jalview_class_should_bind_to_type = Implementation Error: Jalview Class {0} should bind to a {1} (found a {2}) error.invalid_vamsas_rangetype_cannot_resolve_lists = Invalid vamsas RangeType - cannot resolve both lists of Pos and Seg from choice! error.implementation_error_maplist_is_null = Implementation error. MapList is null for initMapType. error.implementation_error_cannot_have_null_alignment = Implementation error: Cannot have null alignment property key error.implementation_error_null_fileparse = Implementation error. Null FileParse in copy constructor error.implementation_error_cannot_map_alignment_sequences = IMPLEMENTATION ERROR: Cannot map an alignment of sequences from different datasets into a single alignment in the vamsas document. -error.implementation_error_cannot_duplicate_colour_scheme = Serious implementation error: cannot duplicate colourscheme {0} error.implementation_error_structure_selection_manager_null = Implementation error. Structure selection manager's context is 'null' exception.ssm_context_is_null = SSM context is null error.idstring_seqstrings_only_one_per_sequence = idstrings and seqstrings contain one string each per sequence @@ -984,7 +975,7 @@ error.cannot_have_zero_length_vector_replacement_strings = Cannot have zero leng error.implementation_error_multiple_single_sequence_prediction_jobs_not_supported = Implementation Error! Multiple single sequence prediction jobs are not yet supported error.implementation_error_invalid_msa_index_for_job =Implementation Error! Invalid msaIndex for JPredJob on parent MSA input object! error.implementation_error_startjob_called = Implementation error - StartJob(JpredJob) called on {0} -error.multiple_jnet_subjob_merge_not_implemented = Multiple JNet subjob merging not yet implemented +error.multiple_jnet_subjob_merge_not_implemented = Multiple JPred subjob merging not yet implemented label.job_never_ran = Job never ran - input returned to user. error.implementation_error_minlen_must_be_greater_zero = Implementation error: minlen must be zero or more error.implementation_error_msawbjob_called = Implementation error - StartJob(MsaWSJob) called on a WSJobInstance {0} @@ -1011,10 +1002,11 @@ error.implementation_error_need_to_have_httpresponse = Implementation Error: nee error.dbrefsource_implementation_exception =DBRefSource Implementation Exception error.implementation_error_dbinstance_must_implement_interface = Implmentation Error - getDbInstances must be given a class that implements jalview.ws.seqfetcher.DbSourceProxy (was given{0}) error.implementation_error_must_init_dbsources =Implementation error. Must initialise dbSources -label.view_controller_toggled_marked = {0} {1} columns {2} containing features of type {3} across {4} sequence(s) +label.view_controller_toggled_marked = {0} {1} columns {2} features of type {3} across {4} sequence(s) label.toggled = Toggled label.marked = Marked -label.not = not +label.containing = containing +label.not_containing = not containing label.no_feature_of_type_found = No features of type {0} found. label.submission_params = Submission {0} label.empty_alignment_job = Empty Alignment Job @@ -1024,7 +1016,7 @@ label.pca_recalculating = Recalculating PCA label.pca_calculating = Calculating PCA label.select_foreground_colour = Choose foreground colour label.select_colour_for_text = Select Colour for Text -label.adjunst_foreground_text_colour_thereshold = Adjust Foreground Text Colour Threshold +label.adjunst_foreground_text_colour_threshold = Adjust Foreground Text Colour Threshold label.select_subtree_colour = Select Sub-Tree Colour label.create_new_sequence_features = Create New Sequence Feature(s) label.amend_delete_features = Amend/Delete Features for {0} @@ -1039,19 +1031,16 @@ exception.replace_null_regex_pointer = Replacer has null Regex pointer exception.bad_pattern_to_regex_perl_code = bad pattern to Regex.perlCode: {0} exception.no_stub_implementation_for_interface = There is no stub implementation for the interface: {0} exception.cannot_set_endpoint_address_unknown_port = Cannot set Endpoint Address for Unknown Port {0} -exception.querying_matching_opening_parenthesis_for_non_closing_parenthesis = Querying matching opening parenthesis for non-closing parenthesis character {0} exception.mismatched_unseen_closing_char = Mismatched (unseen) closing character {0} exception.mismatched_closing_char = Mismatched closing character {0} exception.mismatched_opening_char = Mismatched opening character {0} at {1} exception.invalid_datasource_couldnt_obtain_reader = Invalid datasource. Could not obtain Reader -exception.index_value_not_in_range = {0}: Index value {1} not in range [0..{2}] exception.unterminated_cigar_string = Unterminated cigar string exception.unexpected_operation_cigar_string_pos = Unexpected operation {0} in cigar string (position {1} in {2} exception.couldnt_parse_responde_from_annotated3d_server = Couldn't parse response from Annotate3d server exception.application_test_npe = Application test: throwing an NullPointerException It should arrive at the console exception.overwriting_vamsas_id_binding = Overwriting vamsas id binding exception.overwriting_jalview_id_binding = Overwriting jalview id binding -error.implementation_error_unknown_file_format_string = Implementation error: Unknown file format string exception.failed_to_resolve_gzip_stream = Failed to resolve GZIP stream exception.problem_opening_file_also_tried = Problem opening {0} (also tried {1}) : {2} exception.problem_opening_file = Problem opening {0} : {1} @@ -1072,7 +1061,6 @@ exception.ranml_problem_parsing_data = Problem parsing data as RNAML ({0}) exception.pfam_no_sequences_found = No sequences found (PFAM input) exception.stockholm_invalid_format = This file is not in valid STOCKHOLM format: First line does not contain '# STOCKHOLM' exception.couldnt_parse_sequence_line = Could not parse sequence line: {0} -exception.error_parsing_line = Error parsing {0} exception.unknown_annotation_detected = Unknown annotation detected: {0} {1} exception.couldnt_store_sequence_mappings = Couldn't store sequence mappings for {0} exception.matrix_too_many_iteration = Too many iterations in {0} (max is {1}) @@ -1080,7 +1068,6 @@ exception.browser_not_found = Exception in finding browser: {0} exception.browser_unable_to_locate = Unable to locate browser: {0} exception.invocation_target_exception_creating_aedesc = InvocationTargetException while creating AEDesc: {0} exception.illegal_access_building_apple_evt= IllegalAccessException while building AppleEvent: {0} -exception.instantiation_creating_aedesc = InstantiationException while creating AEDesc: {0} exception.unable_to_launch_url = Unable to launch URL: {0} exception.unable_to_create_internet_config = Unable to create an Internet Config instance: {0} exception.invocation_target_calling_url = InvocationTargetException while calling openURL: {0} @@ -1089,14 +1076,12 @@ exception.interrupted_launching_browser = InterruptedException while launching b exception.das_source_doesnt_support_sequence_command = Source {0} does not support the sequence command. exception.invalid_das_source = Invalid das source: {0} exception.ebiembl_retrieval_failed_on = EBI EMBL XML retrieval failed on {0}:{1} -label.no_embl_record_found = # No EMBL record retrieved for {0}:{1} -label.embl_successfully_parsed = # Successfully parsed the {0} queries into an Alignment exception.no_pdb_records_for_chain = No PDB Records for {0} chain {1} exception.unexpected_handling_rnaml_translation_for_pdb = Unexpected exception when handling RNAML translation of PDB data exception.couldnt_recover_sequence_properties_for_alignment = Couldn't recover sequence properties for alignment exception.unknown_format_for_file = Unknown format {0} for file \: \n{1} label.remove_gaps = Remove Gaps -exception.couldnt_recover_sequence_props_for_jnet_query = Couldn't recover sequence properties for JNet Query sequence! +exception.couldnt_recover_sequence_props_for_jnet_query = Couldn't recover sequence properties for JPred Query sequence! exception.server_timeout_try_later = Server timed out - try again later\n exception.web_service_returned_null_try_later= Server at {0} returned null object, it probably cannot be contacted. Try again later. exception.cannot_contact_service_endpoint_at = Cannot contact service endpoint at {0} @@ -1118,7 +1103,7 @@ info.job_couldnt_be_run_exceeded_hard_limit = Job could not be run because it ex info.job_couldnt_be_run_incorrect_param_setting = Job could not be run because some of the parameter settings are not supported by the server.\n{0}\nPlease check to make sure you have used the correct parameter set for this service\!\n info.no_jobs_ran = No jobs ran info.failed_to_submit_prediction = Failed to submit the prediction\:\n{0} {1} -info.invalid_jnet_job_result_data ={0}\n{1}\nInvalid JNet job result data\!\n{2} +info.invalid_jnet_job_result_data ={0}\n{1}\nInvalid JPred job result data\!\n{2} info.failed_to_submit_sequences_for_alignment = Failed to submit sequences for alignment.\nIt is most likely that there is a problem with the server.\nJust close the window\n info.alignment_object_method_notes = \nAlignment Object Method Notes\n info.server_exception = \n{0} Server exception\!\n{1} @@ -1131,7 +1116,7 @@ status.finished_searching_for_sequences_from = Finished searching for sequences label.eps_file = EPS file label.png_image = PNG image status.saving_file = Saving {0} -status.export_complete = Export complete. +status.export_complete = {0} Export completed. status.fetching_pdb = Fetching PDB {0} status.refreshing_news = Refreshing news status.importing_vamsas_session_from = Importing VAMSAS session from {0} @@ -1151,7 +1136,7 @@ status.das_feature_fetching_complete = DAS Feature Fetching Complete status.fetching_db_refs = Fetching db refs status.loading_cached_pdb_entries = Loading Cached PDB Entries status.searching_for_pdb_structures = Searching for PDB Structures -status.opening_file = opening file +status.opening_file_for = opening file for status.colouring_chimera = Colouring Chimera label.font_doesnt_have_letters_defined = Font doesn't have letters defined\nso cannot be used\nwith alignment data label.font_too_small = Font size is too small @@ -1165,7 +1150,9 @@ warn.user_defined_width_requirements = The user defined width for the\nannotatio label.couldnt_create_sequence_fetcher = Couldn't create SequenceFetcher warn.couldnt_create_sequence_fetcher_client = Could not create the sequence fetcher client. Check error logs for details. warn.server_didnt_pass_validation = Service did not pass validation.\nCheck the Jalview Console for more details. -warn.url_must_contain = Sequence URL must contain $SEQUENCE_ID$ or a regex $SEQUENCE_ID=//=$ +warn.url_must_contain = Sequence URL must contain $SEQUENCE_ID$, $DB_ACCESSION$, or a regex +warn.urls_not_contacted = URLs that could not be contacted +warn.urls_no_jaba = URLs without any JABA Services info.validate_jabaws_server = Validate JabaWS Server ?\n(Look in console output for results) label.test_server = Test Server? info.you_want_jalview_to_find_uniprot_accessions = Do you want Jalview to find\nUniprot Accession ids for given sequence names? @@ -1179,13 +1166,14 @@ label.edit_jabaws_url = Edit JABAWS URL label.add_jabaws_url = Add new JABAWS URL label.news_from_jalview = News from http://www.jalview.org label.cut_paste_alignmen_file = Cut & Paste Alignment File -label.enter_redundancy_thereshold = Enter the redundancy threshold -label.select_dark_light_set_thereshold = Select a dark and light text colour, then set the threshold to
switch between colours, based on background colour +label.enter_redundancy_threshold = Enter the redundancy threshold +label.select_dark_light_set_threshold = Select a dark and light text colour, then set the threshold to
switch between colours, based on background colour label.select_feature_colour = Select Feature Colour label.delete_all = Delete all sequences warn.delete_all = Deleting all sequences will close the alignment window.
Confirm deletion or Cancel. label.add_annotations_for = Add annotations for -label.choose_annotations = Choose annotations +action.choose_annotations = Choose Annotations... +label.choose_annotations = Choose Annotations label.find = Find label.invalid_search = Search string invalid error.invalid_regex = Invalid regular expression @@ -1200,30 +1188,24 @@ label.no_colour_selection_in_scheme = Please make a colour selection before appl label.no_colour_selection_warn = Error saving colour scheme label.open_split_window? = Would you like to open as a split window, with cDNA and protein linked? label.open_split_window = Open split window -label.no_mappings = No mappings found -label.mapping_failed = No sequence mapping could be made between the alignments.
A mapping requires sequence names to match, and equivalent sequence lengths. action.no = No action.yes = Yes label.for = for label.select_by_annotation = Select/Hide Columns by Annotation action.select_by_annotation = Select/Hide Columns by Annotation... label.threshold_filter = Threshold Filter -action.hide = Hide -action.select = Select label.alpha_helix = Alpha Helix label.beta_strand = Beta Strand label.turn = Turn label.select_all = Select All label.structures_filter = Structures Filter label.search_filter = Search Filter -label.description = Description label.include_description= Include Description action.back = Back label.hide_insertions = Hide Insertions label.mark_as_representative = Mark as representative label.open_jabaws_web_page = Open JABAWS web page -label.opens_the_jabaws_server_homepage = Opens the JABAWS server's homepage in web browser -label.pdb_sequence_getcher = PDB Sequence Fetcher +label.pdb_sequence_fetcher = PDB Sequence Fetcher label.result = result label.results = results label.structure_chooser = Structure Chooser @@ -1234,7 +1216,7 @@ info.select_filter_option = Select Filter Option/Manual Entry info.associate_wit_sequence = Associate with Sequence label.search_result = Search Result label.found_structures_summary = Found Structures Summary -label.configure_displayed_columns = Configure Displayed Columns +label.configure_displayed_columns = Customise Displayed Options label.start_jalview = Start Jalview label.biojs_html_export = BioJS label.scale_as_cdna = Scale protein residues to codons @@ -1254,14 +1236,62 @@ action.export_hidden_columns = Export Hidden Columns action.export_hidden_sequences = Export Hidden Sequences action.export_features = Export Features label.export_settings = Export Settings -label.save_as_biojs_html = Save as BioJs HTML label.pdb_web-service_error = PDB Web-service Error label.structure_chooser_manual_association = Structure Chooser - Manual association label.structure_chooser_filter_time = Structure Chooser - Filter time ({0}) label.structure_chooser_no_of_structures = Structure Chooser - {0} Found ({1}) info.no_pdb_entry_found_for = No PDB entry found for {0} exception.unable_to_detect_internet_connection = Jalview is unable to detect an internet connection -exception.pdb_rest_service_no_longer_available = PDB rest services no longer available! +exception.fts_rest_service_no_longer_available = {0} rest services no longer available! exception.resource_not_be_found = The requested resource could not be found -exception.pdb_server_error = There seems to be an error from the PDB server -exception.pdb_server_unreachable = Jalview is unable to reach the PDBe Solr server. \nPlease ensure that you are connected to the internet and try again. +exception.fts_server_error = There seems to be an error from the {0} server +exception.fts_server_unreachable = Jalview is unable to reach the {0} server. \nPlease ensure that you are connected to the internet and try again. +label.nw_mapping = Needleman & Wunsch Alignment +label.sifts_mapping = SIFTs Mapping +label.mapping_method = Sequence \u27f7 Structure mapping method +status.waiting_for_user_to_select_output_file = Waiting for user to select {0} file +status.cancelled_image_export_operation = Cancelled {0} export operation +info.error_creating_file = Error creating {0} file +exception.outofmemory_loading_mmcif_file = Out of memory loading mmCIF File +label.run_groovy = Run Groovy console script +label.run_groovy_tip = Run the script in the Groovy console over this alignment +label.couldnt_run_groovy_script = Failed to run Groovy script +label.uniprot_sequence_fetcher = UniProt Sequence Fetcher +action.next_page= >> +action.prev_page= << +label.next_page_tooltip=Next Page +label.prev_page_tooltip=Previous Page +exception.bad_request=Bad request. There is a problem with your input. +exception.service_not_available=Service not available. The server is being updated, try again later. +status.launching_3d_structure_viewer = Launching 3D Structure viewer... +status.fetching_3d_structures_for_selected_entries = Fetching 3D Structures for selected entries... +status.fetching_dbrefs_for_sequences_without_valid_refs = Fetching db refs for {0} sequence(s) without valid db ref required for SIFTS mapping +status.fetching_3d_structures_for = Fetching 3D Structure for {0} +status.obtaining_mapping_with_sifts = Obtaining mapping with SIFTS +status.obtaining_mapping_with_nw_alignment = Obtaining mapping with NW alignment +status.exporting_alignment_as_x_file = Exporting alignment as {0} file +label.column = Column +label.cant_map_cds = Unable to map CDS to protein\nCDS missing or incomplete +label.operation_failed = Operation failed +label.SEQUENCE_ID_no_longer_used = $SEQUENCE_ID$ is no longer used for DB accessions +label.SEQUENCE_ID_for_DB_ACCESSION1 = Please review your URL links in the 'Connections' tab of the Preferences window: +label.SEQUENCE_ID_for_DB_ACCESSION2 = URL links using '$SEQUENCE_ID$' for DB accessions now use '$DB_ACCESSION$'. +label.do_not_display_again = Do not display this message again +exception.url_cannot_have_miriam_id = {0} is a MIRIAM id and cannot be used as a custom url name +exception.url_cannot_have_duplicate_id = {0} cannot be used as a label for more than one line +label.filter = Filter text: +action.customfilter = Custom only +action.showall = Show All +label.insert = Insert: +action.seq_id = $SEQUENCE_ID$ +action.db_acc = $DB_ACCESSION$ +label.primary = Double Click +label.inmenu = In Menu +label.id = ID +label.database = Database +label.urltooltip = Only one url, which must use a sequence id, can be selected for the 'On Click' option +label.edit_sequence_url_link = Edit sequence URL link +warn.name_cannot_be_duplicate = User-defined URL names must be unique and cannot be MIRIAM ids +label.invalid_name = Invalid Name ! +label.output_seq_details = Output Sequence Details to list all database references +label.urllinks = Links