X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=schemas%2Fjalview.xsd;h=65cf2f89e55dd97e6e05fdbd16da4b1d041520f8;hb=eb57149512e6f339336a19d88a6da081c5f35843;hp=f3cf52b4db8a912d2f141730db94c153251e247c;hpb=18c97ef06d754ca01efd4923a757ca4c8abae534;p=jalview.git

diff --git a/schemas/jalview.xsd b/schemas/jalview.xsd
index f3cf52b..65cf2f8 100755
--- a/schemas/jalview.xsd
+++ b/schemas/jalview.xsd
@@ -37,6 +37,9 @@
 						<xs:attribute name="displayBoxes" type="xs:boolean"/>
 						<xs:attribute name="displayText" type="xs:boolean"/>
 						<xs:attribute name="colourText" type="xs:boolean"/>
+						<xs:attribute name="textCol1" type="xs:int"/>
+						<xs:attribute name="textCol2" type="xs:int"/>
+						<xs:attribute name="textColThreshold" type="xs:int"/>
 					</xs:complexType>
 				</xs:element>
 				<xs:element name="Viewport" maxOccurs="unbounded">
@@ -66,6 +69,7 @@
 						<xs:attribute name="pidThreshold" type="xs:int"/>
 						<xs:attribute name="title" type="xs:string"/>
 						<xs:attribute name="showFullId" type="xs:boolean"/>
+						<xs:attribute name="rightAlignIds" type="xs:boolean"/>
 						<xs:attribute name="showText" type="xs:boolean"/>
 						<xs:attribute name="showColourText" type="xs:boolean"/>
 						<xs:attribute name="showBoxes" type="xs:boolean"/>
@@ -73,9 +77,6 @@
 						<xs:attribute name="renderGaps" type="xs:boolean"/>
 						<xs:attribute name="showSequenceFeatures" type="xs:boolean"/>
 						<xs:attribute name="showAnnotation" type="xs:boolean"/>
-						<xs:attribute name="showConservation" type="xs:boolean"/>
-						<xs:attribute name="showQuality" type="xs:boolean"/>
-						<xs:attribute name="showIdentity" type="xs:boolean"/>
 						<xs:attribute name="xpos" type="xs:int"/>
 						<xs:attribute name="ypos" type="xs:int"/>
 						<xs:attribute name="width" type="xs:int"/>
@@ -88,6 +89,9 @@
 						<xs:attribute name="viewName" type="xs:string"/>
 						<xs:attribute name="sequenceSetId" type="xs:string"/>
 						<xs:attribute name="gatheredViews" type="xs:boolean"/>
+						<xs:attribute name="textCol1" type="xs:int"/>
+						<xs:attribute name="textCol2" type="xs:int"/>
+						<xs:attribute name="textColThreshold" type="xs:int"/>
 					</xs:complexType>
 				</xs:element>
 				<xs:element name="UserColours" minOccurs="0" maxOccurs="unbounded">