X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=schemas%2Fjalview.xsd;h=cd05e5f2d69f2980e97796966a25e2aeeee90452;hb=47d13cdd39a8ce2f59adda6bc9b79374dd49be56;hp=c52853971b32882c850bae3145a6f4b28fa626b3;hpb=5f38ef0b2ae1355b51fd79cfac56f261f4bd78a7;p=jalview.git

diff --git a/schemas/jalview.xsd b/schemas/jalview.xsd
index c528539..cd05e5f 100755
--- a/schemas/jalview.xsd
+++ b/schemas/jalview.xsd
@@ -10,6 +10,11 @@
 	Public License for more details. * * You should have received a copy of the 
 	GNU General Public License along with Jalview. If not, see <http://www.gnu.org/licenses/>. 
 	* The Jalview Authors are detailed in the 'AUTHORS' file. -->
+<!-- 
+	Java JAXB binding classes are generated by running command line tool xjc:
+ 	    xjc schemas/jalview.xsd -d src -p jalview.xml.binding.jalview
+ 	Note this also generates code for included schemas
+-->
 <xs:schema xmlns:xs="http://www.w3.org/2001/XMLSchema"
 	xmlns:vamsas="www.vamsas.ac.uk/jalview/version2" xmlns:jalview="www.jalview.org/colours"
 	xmlns:jv="www.jalview.org" xmlns:jvws="www.jalview.org/xml/wsparamset"
@@ -21,6 +26,7 @@
 		schemaLocation="JalviewUserColours.xsd" />
 	<xs:import namespace="www.jalview.org/xml/wsparamset"
 		schemaLocation="JalviewWsParamSet.xsd" />
+	<xs:element name="JalviewModel" type="jv:JalviewModel" />
 	<xs:complexType name="JalviewModel">
 		<xs:sequence>
 			<xs:element name="creationDate" type="xs:dateTime" />
@@ -385,6 +391,16 @@
 									</xs:complexContent>
 								</xs:complexType>
 							</xs:element>
+							<xs:element name="overview" minOccurs="0">
+							  <xs:complexType>
+								<xs:attributeGroup ref="jv:swingwindow" />
+								<xs:attribute name="showHidden" type="xs:boolean" />
+								<xs:attribute name="residueColour" type="xs:int" />
+								<xs:attribute name="gapColour" type="xs:int" />
+								<xs:attribute name="hiddenColour" type="xs:int" />
+								<xs:attribute name="title" type="xs:string" />
+							  </xs:complexType>
+							</xs:element>
 						</xs:sequence>
 						<xs:attributeGroup ref="jv:swingwindow" />
 						<xs:attribute name="conservationSelected" type="xs:boolean" />
@@ -457,6 +473,8 @@
 								</xs:documentation>
 							</xs:annotation>
 						</xs:attribute>
+						<xs:attribute name="showComplementFeatures" type="xs:boolean" use="optional" default="false" />
+						<xs:attribute name="showComplementFeaturesOnTop" type="xs:boolean" use="optional" default="false" />
 					</xs:complexType>
 				</xs:element>
 				<xs:element name="UserColours" minOccurs="0" maxOccurs="unbounded">