X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=schemas%2Fvamsas.xsd;h=2ef0c155b0e4a0e0662c763dcc44b6ed712c6e5b;hb=cbeb7ad59d51b468c54ca3db2a2a7693060a2509;hp=9c95d5f580cec85f04f99353e151be0a388a00b2;hpb=17e77c3f2949a0729322b4a8d907f3f34b6a9914;p=jalview.git

diff --git a/schemas/vamsas.xsd b/schemas/vamsas.xsd
index 9c95d5f..2ef0c15 100755
--- a/schemas/vamsas.xsd
+++ b/schemas/vamsas.xsd
@@ -1,7 +1,7 @@
 <?xml version="1.0" encoding="UTF-8"?>
 <!--
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9)
- * Copyright (C) 2015 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -18,6 +18,11 @@
  * The Jalview Authors are detailed in the 'AUTHORS' file.
 -->
 <!-- edited with XMLSpy v2006 sp1 U (http://www.altova.com) by ioh[ (o[ih[oh) -->
+<!-- 
+	Java JAXB binding classes are generated by running command line tool xjc:
+ 	    xjc schemas/jalview.xsd -d src -p jalview.xml.binding.jalview
+ 	Note this also generates code for included schemas
+-->
 <xs:schema xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:vamsas="www.vamsas.ac.uk/jalview/version2" targetNamespace="www.vamsas.ac.uk/jalview/version2" elementFormDefault="qualified" attributeFormDefault="unqualified">
 	<xs:complexType name="VAMSAS">
 		<xs:sequence>
@@ -156,6 +161,13 @@
 								<xs:attribute name="source" type="xs:string"/>
 								<xs:attribute name="version" type="xs:string"/>
 								<xs:attribute name="accessionId" type="xs:string"/>
+								<xs:attribute name="locus" type="xs:boolean" default="false">
+									<xs:annotation>
+										<xs:documentation>
+											true for gene locus mapping, source=species, version=assembly, accession=chromosome
+										</xs:documentation>
+									</xs:annotation>
+								</xs:attribute>
 							</xs:complexType>
 						</xs:element>
 					</xs:sequence>