X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=schemas%2Fvamsas.xsd;h=72ac603d3a5195fcb5434494e21067f159605fcf;hb=refs%2Fheads%2Ffeature%2FJAL-3187viewstyleFlags;hp=65a1307ea4ee955ddaed2da58a5121728920bf42;hpb=ad15cff29620f960119f80176f1fd443da9f6763;p=jalview.git

diff --git a/schemas/vamsas.xsd b/schemas/vamsas.xsd
index 65a1307..72ac603 100755
--- a/schemas/vamsas.xsd
+++ b/schemas/vamsas.xsd
@@ -18,6 +18,11 @@
  * The Jalview Authors are detailed in the 'AUTHORS' file.
 -->
 <!-- edited with XMLSpy v2006 sp1 U (http://www.altova.com) by ioh[ (o[ih[oh) -->
+<!-- 
+	Java JAXB binding classes are generated by running command line tool xjc:
+ 	    xjc schemas/jalview.xsd -d src -p jalview.xml.binding.jalview
+ 	Note this also generates code for included schemas
+-->
 <xs:schema xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:vamsas="www.vamsas.ac.uk/jalview/version2" targetNamespace="www.vamsas.ac.uk/jalview/version2" elementFormDefault="qualified" attributeFormDefault="unqualified">
 	<xs:complexType name="VAMSAS">
 		<xs:sequence>
@@ -98,6 +103,11 @@
 							</xs:element>
 						</xs:choice>
 					</xs:sequence>
+					<xs:attribute name="mappingType" type="xs:string" use="optional">
+						<xs:annotation>
+							<xs:documentation>Biotype of the mapping e.g. CdsToPeptide</xs:documentation>
+						</xs:annotation>
+					</xs:attribute>
 				</xs:extension>
 			</xs:complexContent>	
 		</xs:complexType>
@@ -166,6 +176,13 @@
 							</xs:documentation>
 						</xs:annotation>
 					</xs:attribute>
+					<xs:attribute name="biotype" type="xs:string" use="optional">
+						<xs:annotation>
+							<xs:documentation>
+								Biotype of the sequence (if known)
+							</xs:documentation>
+						</xs:annotation>
+					</xs:attribute>
 				</xs:extension>
 			</xs:complexContent>
 		</xs:complexType>