X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2FMCview%2FBond.java;fp=src%2FMCview%2FBond.java;h=1f2edd2f013064af70a382beedf580a26abb404d;hb=c777b335d0332979123446f431b7f0c160eb4880;hp=18011fbbb70135ba0113ffd317c6990599379425;hpb=4d046b841f14a5d743fb2de8d99ccee86ad4ef9d;p=jalview.git

diff --git a/src/MCview/Bond.java b/src/MCview/Bond.java
index 18011fb..1f2edd2 100755
--- a/src/MCview/Bond.java
+++ b/src/MCview/Bond.java
@@ -20,7 +20,7 @@
  */
 package MCview;
 
-import java.awt.*;
+import java.awt.Color;
 
 public class Bond
 {
@@ -36,10 +36,12 @@ public class Bond
 
   public Atom at2;
 
-  public Bond(float[] start, float[] end, Atom at1, Atom at2)
+  public Bond(Atom at1, Atom at2)
   {
-    this.start = start;
-    this.end = end;
+    this.start = new float[]
+    { at1.x, at1.y, at1.z };
+    this.end = new float[]
+    { at2.x, at2.y, at2.z };
     this.startCol = at1.color;
     this.endCol = at2.color;
     this.at1 = at1;
@@ -70,13 +72,13 @@ public class Bond
 
   public void translate(float x, float y, float z)
   {
-    start[0] = (start[0] + x);
-    end[0] = (end[0] + x);
+    start[0] = start[0] + x;
+    end[0] = end[0] + x;
 
-    start[1] = (start[1] + y);
-    end[1] = (end[1] + y);
+    start[1] = start[1] + y;
+    end[1] = end[1] + y;
 
-    start[2] = (start[2] + z);
-    end[2] = (end[2] + z);
+    start[2] = start[2] + z;
+    end[2] = end[2] + z;
   }
 }