X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fcom%2Fstevesoft%2Fpat%2FSkip2.java;h=b498a3e95e64e1116739c0d5548977822eb27288;hb=4231d40261fef32ce4570a6bbad0d35df44e8baf;hp=5f6bb5a814b8713b048b0e63deb603315d8a3d92;hpb=c07eb2c5794833bd0241000d6844d783fe10cb82;p=jalview.git

diff --git a/src/com/stevesoft/pat/Skip2.java b/src/com/stevesoft/pat/Skip2.java
index 5f6bb5a..b498a3e 100755
--- a/src/com/stevesoft/pat/Skip2.java
+++ b/src/com/stevesoft/pat/Skip2.java
@@ -46,7 +46,7 @@ public class Skip2 extends Skip
       if (0 == (s.charAt(i) & mask) && 0 == (s.charAt(i + 1) & mask1))
       {
         // if(m1||s.regionMatches(ign,i,src,0,src.length()) )
-        if (m1 || CaseMgr.regionMatches(s, ign, i, src, 0, src.length()))
+        if (m1 || CaseMgr.regionMatchesLike2(s, ign, i, src, 0, src.length()))
         {
           return i - offset;
         }