X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fext%2Fvamsas%2FJpredSoapBindingStub.java;h=4c8fc7f0ec4e5bcec790e164215aeb9b852b9afe;hb=7bc226b58110fa26d9dbd3f0c78095d06909ffc3;hp=a42bc490922076f44eae4551b6867f1cab6b3c3d;hpb=dd74fc4938723fe5ec48d4e5fdcfbe58ac42a48d;p=jalview.git

diff --git a/src/ext/vamsas/JpredSoapBindingStub.java b/src/ext/vamsas/JpredSoapBindingStub.java
index a42bc49..4c8fc7f 100755
--- a/src/ext/vamsas/JpredSoapBindingStub.java
+++ b/src/ext/vamsas/JpredSoapBindingStub.java
@@ -7,293 +7,389 @@
 
 package ext.vamsas;
 
-public class JpredSoapBindingStub extends org.apache.axis.client.Stub implements ext.vamsas.Jpred {
-    private java.util.Vector cachedSerClasses = new java.util.Vector();
-    private java.util.Vector cachedSerQNames = new java.util.Vector();
-    private java.util.Vector cachedSerFactories = new java.util.Vector();
-    private java.util.Vector cachedDeserFactories = new java.util.Vector();
+public class JpredSoapBindingStub
+    extends org.apache.axis.client.Stub implements ext.vamsas.Jpred
+{
+  private java.util.Vector cachedSerClasses = new java.util.Vector();
+  private java.util.Vector cachedSerQNames = new java.util.Vector();
+  private java.util.Vector cachedSerFactories = new java.util.Vector();
+  private java.util.Vector cachedDeserFactories = new java.util.Vector();
 
-    static org.apache.axis.description.OperationDesc [] _operations;
+  static org.apache.axis.description.OperationDesc[] _operations;
 
-    static {
-        _operations = new org.apache.axis.description.OperationDesc[4];
-        _initOperationDesc1();
-    }
+  static
+  {
+    _operations = new org.apache.axis.description.OperationDesc[4];
+    _initOperationDesc1();
+  }
 
-    private static void _initOperationDesc1(){
-        org.apache.axis.description.OperationDesc oper;
-        oper = new org.apache.axis.description.OperationDesc();
-        oper.setName("predict");
-        oper.addParameter(new javax.xml.namespace.QName("", "seq"), new javax.xml.namespace.QName("simple.objects.vamsas", "Sequence"), vamsas.objects.simple.Sequence.class, org.apache.axis.description.ParameterDesc.IN, false, false);
-        oper.setReturnType(new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"));
-        oper.setReturnClass(java.lang.String.class);
-        oper.setReturnQName(new javax.xml.namespace.QName("", "predictReturn"));
-        oper.setStyle(org.apache.axis.constants.Style.RPC);
-        oper.setUse(org.apache.axis.constants.Use.ENCODED);
-        _operations[0] = oper;
+  private static void _initOperationDesc1()
+  {
+    org.apache.axis.description.OperationDesc oper;
+    oper = new org.apache.axis.description.OperationDesc();
+    oper.setName("predict");
+    oper.addParameter(new javax.xml.namespace.QName("", "seq"),
+                      new javax.xml.
+                      namespace.QName("simple.objects.vamsas", "Sequence"),
+                      vamsas.objects.simple.Sequence.class,
+                      org.apache.axis.description.ParameterDesc.IN, false, false);
+    oper.setReturnType(new javax.xml.namespace.QName(
+        "http://www.w3.org/2001/XMLSchema", "string"));
+    oper.setReturnClass(java.lang.String.class);
+    oper.setReturnQName(new javax.xml.namespace.QName("", "predictReturn"));
+    oper.setStyle(org.apache.axis.constants.Style.RPC);
+    oper.setUse(org.apache.axis.constants.Use.ENCODED);
+    _operations[0] = oper;
 
-        oper = new org.apache.axis.description.OperationDesc();
-        oper.setName("predictOnMsa");
-        oper.addParameter(new javax.xml.namespace.QName("", "msf"), new javax.xml.namespace.QName("http://simple.objects.vamsas", "Msfalignment"), vamsas.objects.simple.Msfalignment.class, org.apache.axis.description.ParameterDesc.IN, false, false);
-        oper.setReturnType(new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"));
-        oper.setReturnClass(java.lang.String.class);
-        oper.setReturnQName(new javax.xml.namespace.QName("", "predictOnMsaReturn"));
-        oper.setStyle(org.apache.axis.constants.Style.RPC);
-        oper.setUse(org.apache.axis.constants.Use.ENCODED);
-        _operations[1] = oper;
+    oper = new org.apache.axis.description.OperationDesc();
+    oper.setName("predictOnMsa");
+    oper.addParameter(new javax.xml.namespace.QName("", "msf"),
+                      new javax.xml.
+                      namespace.QName("http://simple.objects.vamsas",
+                                      "Msfalignment"),
+                      vamsas.objects.simple.Msfalignment.class,
+                      org.apache.axis.description.ParameterDesc.IN, false, false);
+    oper.setReturnType(new javax.xml.namespace.QName(
+        "http://www.w3.org/2001/XMLSchema", "string"));
+    oper.setReturnClass(java.lang.String.class);
+    oper.setReturnQName(new javax.xml.namespace.QName("", "predictOnMsaReturn"));
+    oper.setStyle(org.apache.axis.constants.Style.RPC);
+    oper.setUse(org.apache.axis.constants.Use.ENCODED);
+    _operations[1] = oper;
 
-        oper = new org.apache.axis.description.OperationDesc();
-        oper.setName("getpredict");
-        oper.addParameter(new javax.xml.namespace.QName("", "job_id"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, org.apache.axis.description.ParameterDesc.IN, false, false);
-        oper.setReturnType(new javax.xml.namespace.QName("http://simple.objects.vamsas", "Secstructpred"));
-        oper.setReturnClass(vamsas.objects.simple.Secstructpred.class);
-        oper.setReturnQName(new javax.xml.namespace.QName("", "getpredictReturn"));
-        oper.setStyle(org.apache.axis.constants.Style.RPC);
-        oper.setUse(org.apache.axis.constants.Use.ENCODED);
-        _operations[2] = oper;
+    oper = new org.apache.axis.description.OperationDesc();
+    oper.setName("getpredict");
+    oper.addParameter(new javax.xml.namespace.QName("", "job_id"),
+                      new javax.
+                      xml.namespace.QName("http://www.w3.org/2001/XMLSchema",
+                                          "string"), java.lang.String.class,
+                      org.apache.axis.description.ParameterDesc.IN, false, false);
+    oper.setReturnType(new javax.xml.namespace.QName(
+        "http://simple.objects.vamsas", "Secstructpred"));
+    oper.setReturnClass(vamsas.objects.simple.Secstructpred.class);
+    oper.setReturnQName(new javax.xml.namespace.QName("", "getpredictReturn"));
+    oper.setStyle(org.apache.axis.constants.Style.RPC);
+    oper.setUse(org.apache.axis.constants.Use.ENCODED);
+    _operations[2] = oper;
 
-        oper = new org.apache.axis.description.OperationDesc();
-        oper.setName("getresult");
-        oper.addParameter(new javax.xml.namespace.QName("", "job_id"), new javax.xml.namespace.QName("http://www.w3.org/2001/XMLSchema", "string"), java.lang.String.class, org.apache.axis.description.ParameterDesc.IN, false, false);
-        oper.setReturnType(new javax.xml.namespace.QName("http://simple.objects.vamsas", "JpredResult"));
-        oper.setReturnClass(vamsas.objects.simple.JpredResult.class);
-        oper.setReturnQName(new javax.xml.namespace.QName("", "getresultReturn"));
-        oper.setStyle(org.apache.axis.constants.Style.RPC);
-        oper.setUse(org.apache.axis.constants.Use.ENCODED);
-        _operations[3] = oper;
+    oper = new org.apache.axis.description.OperationDesc();
+    oper.setName("getresult");
+    oper.addParameter(new javax.xml.namespace.QName("", "job_id"),
+                      new javax.
+                      xml.namespace.QName("http://www.w3.org/2001/XMLSchema",
+                                          "string"), java.lang.String.class,
+                      org.apache.axis.description.ParameterDesc.IN, false, false);
+    oper.setReturnType(new javax.xml.namespace.QName(
+        "http://simple.objects.vamsas", "JpredResult"));
+    oper.setReturnClass(vamsas.objects.simple.JpredResult.class);
+    oper.setReturnQName(new javax.xml.namespace.QName("", "getresultReturn"));
+    oper.setStyle(org.apache.axis.constants.Style.RPC);
+    oper.setUse(org.apache.axis.constants.Use.ENCODED);
+    _operations[3] = oper;
 
-    }
+  }
 
-    public JpredSoapBindingStub() throws org.apache.axis.AxisFault {
-         this(null);
-    }
+  public JpredSoapBindingStub()
+      throws org.apache.axis.AxisFault
+  {
+    this(null);
+  }
 
-    public JpredSoapBindingStub(java.net.URL endpointURL, javax.xml.rpc.Service service) throws org.apache.axis.AxisFault {
-         this(service);
-         super.cachedEndpoint = endpointURL;
-    }
+  public JpredSoapBindingStub(java.net.URL endpointURL,
+                              javax.xml.rpc.Service service)
+      throws org.apache.axis.AxisFault
+  {
+    this(service);
+    super.cachedEndpoint = endpointURL;
+  }
 
-    public JpredSoapBindingStub(javax.xml.rpc.Service service) throws org.apache.axis.AxisFault {
-        if (service == null) {
-            super.service = new org.apache.axis.client.Service();
-        } else {
-            super.service = service;
-        }
-            java.lang.Class cls;
-            javax.xml.namespace.QName qName;
-            java.lang.Class beansf = org.apache.axis.encoding.ser.BeanSerializerFactory.class;
-            java.lang.Class beandf = org.apache.axis.encoding.ser.BeanDeserializerFactory.class;
-            /*java.lang.Class enumsf = org.apache.axis.encoding.ser.EnumSerializerFactory.class;
-            java.lang.Class enumdf = org.apache.axis.encoding.ser.EnumDeserializerFactory.class;
-            java.lang.Class arraysf = org.apache.axis.encoding.ser.ArraySerializerFactory.class;
-            java.lang.Class arraydf = org.apache.axis.encoding.ser.ArrayDeserializerFactory.class;
-            java.lang.Class simplesf = org.apache.axis.encoding.ser.SimpleSerializerFactory.class;
-            java.lang.Class simpledf = org.apache.axis.encoding.ser.SimpleDeserializerFactory.class;
-            java.lang.Class simplelistsf = org.apache.axis.encoding.ser.SimpleListSerializerFactory.class;
-            java.lang.Class simplelistdf = org.apache.axis.encoding.ser.SimpleListDeserializerFactory.class;*/
-            qName = new javax.xml.namespace.QName("http://simple.objects.vamsas", "JpredResult");
-            cachedSerQNames.add(qName);
-            cls = vamsas.objects.simple.JpredResult.class;
-            cachedSerClasses.add(cls);
-            cachedSerFactories.add(beansf);
-            cachedDeserFactories.add(beandf);
+  public JpredSoapBindingStub(javax.xml.rpc.Service service)
+      throws org.apache.axis.AxisFault
+  {
+    if (service == null)
+    {
+      super.service = new org.apache.axis.client.Service();
+    }
+    else
+    {
+      super.service = service;
+    }
+    java.lang.Class cls;
+    javax.xml.namespace.QName qName;
+    java.lang.Class beansf = org.apache.axis.encoding.ser.BeanSerializerFactory.class;
+    java.lang.Class beandf = org.apache.axis.encoding.ser.
+        BeanDeserializerFactory.class;
+    /*java.lang.Class enumsf = org.apache.axis.encoding.ser.EnumSerializerFactory.class;
+                 java.lang.Class enumdf = org.apache.axis.encoding.ser.EnumDeserializerFactory.class;
+                 java.lang.Class arraysf = org.apache.axis.encoding.ser.ArraySerializerFactory.class;
+                 java.lang.Class arraydf = org.apache.axis.encoding.ser.ArrayDeserializerFactory.class;
+                 java.lang.Class simplesf = org.apache.axis.encoding.ser.SimpleSerializerFactory.class;
+                 java.lang.Class simpledf = org.apache.axis.encoding.ser.SimpleDeserializerFactory.class;
+                 java.lang.Class simplelistsf = org.apache.axis.encoding.ser.SimpleListSerializerFactory.class;
+                 java.lang.Class simplelistdf = org.apache.axis.encoding.ser.SimpleListDeserializerFactory.class;*/
+    qName = new javax.xml.namespace.QName("http://simple.objects.vamsas",
+                                          "JpredResult");
+    cachedSerQNames.add(qName);
+    cls = vamsas.objects.simple.JpredResult.class;
+    cachedSerClasses.add(cls);
+    cachedSerFactories.add(beansf);
+    cachedDeserFactories.add(beandf);
 
-            qName = new javax.xml.namespace.QName("simple.objects.vamsas", "Result");
-            cachedSerQNames.add(qName);
-            cls = vamsas.objects.simple.Result.class;
-            cachedSerClasses.add(cls);
-            cachedSerFactories.add(beansf);
-            cachedDeserFactories.add(beandf);
+    qName = new javax.xml.namespace.QName("simple.objects.vamsas", "Result");
+    cachedSerQNames.add(qName);
+    cls = vamsas.objects.simple.Result.class;
+    cachedSerClasses.add(cls);
+    cachedSerFactories.add(beansf);
+    cachedDeserFactories.add(beandf);
 
-            qName = new javax.xml.namespace.QName("http://simple.objects.vamsas", "Secstructpred");
-            cachedSerQNames.add(qName);
-            cls = vamsas.objects.simple.Secstructpred.class;
-            cachedSerClasses.add(cls);
-            cachedSerFactories.add(beansf);
-            cachedDeserFactories.add(beandf);
+    qName = new javax.xml.namespace.QName("http://simple.objects.vamsas",
+                                          "Secstructpred");
+    cachedSerQNames.add(qName);
+    cls = vamsas.objects.simple.Secstructpred.class;
+    cachedSerClasses.add(cls);
+    cachedSerFactories.add(beansf);
+    cachedDeserFactories.add(beandf);
 
-            qName = new javax.xml.namespace.QName("http://simple.objects.vamsas", "Msfalignment");
-            cachedSerQNames.add(qName);
-            cls = vamsas.objects.simple.Msfalignment.class;
-            cachedSerClasses.add(cls);
-            cachedSerFactories.add(beansf);
-            cachedDeserFactories.add(beandf);
+    qName = new javax.xml.namespace.QName("http://simple.objects.vamsas",
+                                          "Msfalignment");
+    cachedSerQNames.add(qName);
+    cls = vamsas.objects.simple.Msfalignment.class;
+    cachedSerClasses.add(cls);
+    cachedSerFactories.add(beansf);
+    cachedDeserFactories.add(beandf);
 
-            qName = new javax.xml.namespace.QName("simple.objects.vamsas", "Sequence");
-            cachedSerQNames.add(qName);
-            cls = vamsas.objects.simple.Sequence.class;
-            cachedSerClasses.add(cls);
-            cachedSerFactories.add(beansf);
-            cachedDeserFactories.add(beandf);
+    qName = new javax.xml.namespace.QName("simple.objects.vamsas", "Sequence");
+    cachedSerQNames.add(qName);
+    cls = vamsas.objects.simple.Sequence.class;
+    cachedSerClasses.add(cls);
+    cachedSerFactories.add(beansf);
+    cachedDeserFactories.add(beandf);
 
-    }
+  }
 
-    protected org.apache.axis.client.Call createCall() throws java.rmi.RemoteException {
-        try {
-            org.apache.axis.client.Call _call =
-                    (org.apache.axis.client.Call) super.service.createCall();
-            if (super.maintainSessionSet) {
-                _call.setMaintainSession(super.maintainSession);
-            }
-            if (super.cachedUsername != null) {
-                _call.setUsername(super.cachedUsername);
-            }
-            if (super.cachedPassword != null) {
-                _call.setPassword(super.cachedPassword);
-            }
-            if (super.cachedEndpoint != null) {
-                _call.setTargetEndpointAddress(super.cachedEndpoint);
-            }
-            if (super.cachedTimeout != null) {
-                _call.setTimeout(super.cachedTimeout);
-            }
-            if (super.cachedPortName != null) {
-                _call.setPortName(super.cachedPortName);
-            }
-            java.util.Enumeration keys = super.cachedProperties.keys();
-            while (keys.hasMoreElements()) {
-                java.lang.String key = (java.lang.String) keys.nextElement();
-                _call.setProperty(key, super.cachedProperties.get(key));
-            }
-            // All the type mapping information is registered
-            // when the first call is made.
-            // The type mapping information is actually registered in
-            // the TypeMappingRegistry of the service, which
-            // is the reason why registration is only needed for the first call.
-            synchronized (this) {
-                if (firstCall()) {
-                    // must set encoding style before registering serializers
-                    _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
-                    _call.setEncodingStyle(org.apache.axis.Constants.URI_SOAP11_ENC);
-                    for (int i = 0; i < cachedSerFactories.size(); ++i) {
-                        java.lang.Class cls = (java.lang.Class) cachedSerClasses.get(i);
-                        javax.xml.namespace.QName qName =
-                                (javax.xml.namespace.QName) cachedSerQNames.get(i);
-                        java.lang.Class sf = (java.lang.Class)
-                                 cachedSerFactories.get(i);
-                        java.lang.Class df = (java.lang.Class)
-                                 cachedDeserFactories.get(i);
-                        _call.registerTypeMapping(cls, qName, sf, df, false);
-                    }
-                }
-            }
-            return _call;
-        }
-        catch (java.lang.Throwable _t) {
-            throw new org.apache.axis.AxisFault("Failure trying to get the Call object", _t);
+  protected org.apache.axis.client.Call createCall()
+      throws java.rmi.RemoteException
+  {
+    try
+    {
+      org.apache.axis.client.Call _call =
+          (org.apache.axis.client.Call)super.service.createCall();
+      if (super.maintainSessionSet)
+      {
+        _call.setMaintainSession(super.maintainSession);
+      }
+      if (super.cachedUsername != null)
+      {
+        _call.setUsername(super.cachedUsername);
+      }
+      if (super.cachedPassword != null)
+      {
+        _call.setPassword(super.cachedPassword);
+      }
+      if (super.cachedEndpoint != null)
+      {
+        _call.setTargetEndpointAddress(super.cachedEndpoint);
+      }
+      if (super.cachedTimeout != null)
+      {
+        _call.setTimeout(super.cachedTimeout);
+      }
+      if (super.cachedPortName != null)
+      {
+        _call.setPortName(super.cachedPortName);
+      }
+      java.util.Enumeration keys = super.cachedProperties.keys();
+      while (keys.hasMoreElements())
+      {
+        java.lang.String key = (java.lang.String) keys.nextElement();
+        _call.setProperty(key, super.cachedProperties.get(key));
+      }
+      // All the type mapping information is registered
+      // when the first call is made.
+      // The type mapping information is actually registered in
+      // the TypeMappingRegistry of the service, which
+      // is the reason why registration is only needed for the first call.
+      synchronized (this)
+      {
+        if (firstCall())
+        {
+          // must set encoding style before registering serializers
+          _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.
+                               SOAP11_CONSTANTS);
+          _call.setEncodingStyle(org.apache.axis.Constants.URI_SOAP11_ENC);
+          for (int i = 0; i < cachedSerFactories.size(); ++i)
+          {
+            java.lang.Class cls = (java.lang.Class) cachedSerClasses.get(i);
+            javax.xml.namespace.QName qName =
+                (javax.xml.namespace.QName) cachedSerQNames.get(i);
+            java.lang.Class sf = (java.lang.Class)
+                cachedSerFactories.get(i);
+            java.lang.Class df = (java.lang.Class)
+                cachedDeserFactories.get(i);
+            _call.registerTypeMapping(cls, qName, sf, df, false);
+          }
         }
+      }
+      return _call;
+    }
+    catch (java.lang.Throwable _t)
+    {
+      throw new org.apache.axis.AxisFault(
+          "Failure trying to get the Call object", _t);
     }
+  }
 
-    public java.lang.String predict(vamsas.objects.simple.Sequence seq) throws java.rmi.RemoteException {
-        if (super.cachedEndpoint == null) {
-            throw new org.apache.axis.NoEndPointException();
-        }
-        org.apache.axis.client.Call _call = createCall();
-        _call.setOperation(_operations[0]);
-        _call.setUseSOAPAction(true);
-        _call.setSOAPActionURI("");
-        _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
-        _call.setOperationName(new javax.xml.namespace.QName("vamsas", "predict"));
+  public java.lang.String predict(vamsas.objects.simple.Sequence seq)
+      throws java.rmi.RemoteException
+  {
+    if (super.cachedEndpoint == null)
+    {
+      throw new org.apache.axis.NoEndPointException();
+    }
+    org.apache.axis.client.Call _call = createCall();
+    _call.setOperation(_operations[0]);
+    _call.setUseSOAPAction(true);
+    _call.setSOAPActionURI("");
+    _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
+    _call.setOperationName(new javax.xml.namespace.QName("vamsas", "predict"));
 
-        setRequestHeaders(_call);
-        setAttachments(_call);
-        java.lang.Object _resp = _call.invoke(new java.lang.Object[] {seq});
+    setRequestHeaders(_call);
+    setAttachments(_call);
+    java.lang.Object _resp = _call.invoke(new java.lang.Object[]
+                                          {seq});
 
-        if (_resp instanceof java.rmi.RemoteException) {
-            throw (java.rmi.RemoteException)_resp;
-        }
-        else {
-            extractAttachments(_call);
-            try {
-                return (java.lang.String) _resp;
-            } catch (java.lang.Exception _exception) {
-                return (java.lang.String) org.apache.axis.utils.JavaUtils.convert(_resp, java.lang.String.class);
-            }
-        }
+    if (_resp instanceof java.rmi.RemoteException)
+    {
+      throw (java.rmi.RemoteException) _resp;
+    }
+    else
+    {
+      extractAttachments(_call);
+      try
+      {
+        return (java.lang.String) _resp;
+      }
+      catch (java.lang.Exception _exception)
+      {
+        return (java.lang.String) org.apache.axis.utils.JavaUtils.convert(_resp,
+            java.lang.String.class);
+      }
     }
+  }
 
-    public java.lang.String predictOnMsa(vamsas.objects.simple.Msfalignment msf) throws java.rmi.RemoteException {
-        if (super.cachedEndpoint == null) {
-            throw new org.apache.axis.NoEndPointException();
-        }
-        org.apache.axis.client.Call _call = createCall();
-        _call.setOperation(_operations[1]);
-        _call.setUseSOAPAction(true);
-        _call.setSOAPActionURI("");
-        _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
-        _call.setOperationName(new javax.xml.namespace.QName("vamsas", "predictOnMsa"));
+  public java.lang.String predictOnMsa(vamsas.objects.simple.Msfalignment msf)
+      throws java.rmi.RemoteException
+  {
+    if (super.cachedEndpoint == null)
+    {
+      throw new org.apache.axis.NoEndPointException();
+    }
+    org.apache.axis.client.Call _call = createCall();
+    _call.setOperation(_operations[1]);
+    _call.setUseSOAPAction(true);
+    _call.setSOAPActionURI("");
+    _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
+    _call.setOperationName(new javax.xml.namespace.QName("vamsas",
+        "predictOnMsa"));
 
-        setRequestHeaders(_call);
-        setAttachments(_call);
-        java.lang.Object _resp = _call.invoke(new java.lang.Object[] {msf});
+    setRequestHeaders(_call);
+    setAttachments(_call);
+    java.lang.Object _resp = _call.invoke(new java.lang.Object[]
+                                          {msf});
 
-        if (_resp instanceof java.rmi.RemoteException) {
-            throw (java.rmi.RemoteException)_resp;
-        }
-        else {
-            extractAttachments(_call);
-            try {
-                return (java.lang.String) _resp;
-            } catch (java.lang.Exception _exception) {
-                return (java.lang.String) org.apache.axis.utils.JavaUtils.convert(_resp, java.lang.String.class);
-            }
-        }
+    if (_resp instanceof java.rmi.RemoteException)
+    {
+      throw (java.rmi.RemoteException) _resp;
     }
+    else
+    {
+      extractAttachments(_call);
+      try
+      {
+        return (java.lang.String) _resp;
+      }
+      catch (java.lang.Exception _exception)
+      {
+        return (java.lang.String) org.apache.axis.utils.JavaUtils.convert(_resp,
+            java.lang.String.class);
+      }
+    }
+  }
 
-    public vamsas.objects.simple.Secstructpred getpredict(java.lang.String job_id) throws java.rmi.RemoteException {
-        if (super.cachedEndpoint == null) {
-            throw new org.apache.axis.NoEndPointException();
-        }
-        org.apache.axis.client.Call _call = createCall();
-        _call.setOperation(_operations[2]);
-        _call.setUseSOAPAction(true);
-        _call.setSOAPActionURI("");
-        _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
-        _call.setOperationName(new javax.xml.namespace.QName("vamsas", "getpredict"));
+  public vamsas.objects.simple.Secstructpred getpredict(java.lang.String job_id)
+      throws java.rmi.RemoteException
+  {
+    if (super.cachedEndpoint == null)
+    {
+      throw new org.apache.axis.NoEndPointException();
+    }
+    org.apache.axis.client.Call _call = createCall();
+    _call.setOperation(_operations[2]);
+    _call.setUseSOAPAction(true);
+    _call.setSOAPActionURI("");
+    _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
+    _call.setOperationName(new javax.xml.namespace.QName("vamsas", "getpredict"));
 
-        setRequestHeaders(_call);
-        setAttachments(_call);
-        java.lang.Object _resp = _call.invoke(new java.lang.Object[] {job_id});
+    setRequestHeaders(_call);
+    setAttachments(_call);
+    java.lang.Object _resp = _call.invoke(new java.lang.Object[]
+                                          {job_id});
 
-        if (_resp instanceof java.rmi.RemoteException) {
-            throw (java.rmi.RemoteException)_resp;
-        }
-        else {
-            extractAttachments(_call);
-            try {
-                return (vamsas.objects.simple.Secstructpred) _resp;
-            } catch (java.lang.Exception _exception) {
-                return (vamsas.objects.simple.Secstructpred) org.apache.axis.utils.JavaUtils.convert(_resp, vamsas.objects.simple.Secstructpred.class);
-            }
-        }
+    if (_resp instanceof java.rmi.RemoteException)
+    {
+      throw (java.rmi.RemoteException) _resp;
+    }
+    else
+    {
+      extractAttachments(_call);
+      try
+      {
+        return (vamsas.objects.simple.Secstructpred) _resp;
+      }
+      catch (java.lang.Exception _exception)
+      {
+        return (vamsas.objects.simple.Secstructpred) org.apache.axis.utils.
+            JavaUtils.convert(_resp, vamsas.objects.simple.Secstructpred.class);
+      }
     }
+  }
 
-    public vamsas.objects.simple.JpredResult getresult(java.lang.String job_id) throws java.rmi.RemoteException {
-        if (super.cachedEndpoint == null) {
-            throw new org.apache.axis.NoEndPointException();
-        }
-        org.apache.axis.client.Call _call = createCall();
-        _call.setOperation(_operations[3]);
-        _call.setUseSOAPAction(true);
-        _call.setSOAPActionURI("");
-        _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
-        _call.setOperationName(new javax.xml.namespace.QName("vamsas", "getresult"));
+  public vamsas.objects.simple.JpredResult getresult(java.lang.String job_id)
+      throws java.rmi.RemoteException
+  {
+    if (super.cachedEndpoint == null)
+    {
+      throw new org.apache.axis.NoEndPointException();
+    }
+    org.apache.axis.client.Call _call = createCall();
+    _call.setOperation(_operations[3]);
+    _call.setUseSOAPAction(true);
+    _call.setSOAPActionURI("");
+    _call.setSOAPVersion(org.apache.axis.soap.SOAPConstants.SOAP11_CONSTANTS);
+    _call.setOperationName(new javax.xml.namespace.QName("vamsas", "getresult"));
 
-        setRequestHeaders(_call);
-        setAttachments(_call);
-        java.lang.Object _resp = _call.invoke(new java.lang.Object[] {job_id});
+    setRequestHeaders(_call);
+    setAttachments(_call);
+    java.lang.Object _resp = _call.invoke(new java.lang.Object[]
+                                          {job_id});
 
-        if (_resp instanceof java.rmi.RemoteException) {
-            throw (java.rmi.RemoteException)_resp;
-        }
-        else {
-            extractAttachments(_call);
-            try {
-                return (vamsas.objects.simple.JpredResult) _resp;
-            } catch (java.lang.Exception _exception) {
-                return (vamsas.objects.simple.JpredResult) org.apache.axis.utils.JavaUtils.convert(_resp, vamsas.objects.simple.JpredResult.class);
-            }
-        }
+    if (_resp instanceof java.rmi.RemoteException)
+    {
+      throw (java.rmi.RemoteException) _resp;
+    }
+    else
+    {
+      extractAttachments(_call);
+      try
+      {
+        return (vamsas.objects.simple.JpredResult) _resp;
+      }
+      catch (java.lang.Exception _exception)
+      {
+        return (vamsas.objects.simple.JpredResult) org.apache.axis.utils.
+            JavaUtils.convert(_resp, vamsas.objects.simple.JpredResult.class);
+      }
     }
+  }
 
 }