X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fanalysis%2FAlignmentSorter.java;h=59cdccfc49cfd207ba8f61b4a2f752dc0066d99d;hb=0a5ce6145bb76fc7eb8a5cc2670e20453fbedd29;hp=5ee4bcbfe112aaa0e82e22ba5296fd71111b810e;hpb=66d479709f80154ea834491afce7ac894128617e;p=jalview.git diff --git a/src/jalview/analysis/AlignmentSorter.java b/src/jalview/analysis/AlignmentSorter.java index 5ee4bcb..59cdccf 100755 --- a/src/jalview/analysis/AlignmentSorter.java +++ b/src/jalview/analysis/AlignmentSorter.java @@ -719,10 +719,12 @@ public class AlignmentSorter public static void sortByFeature(String featureLabel, String groupLabel, int start, int stop, AlignmentI alignment, String method) { - sortByFeature(featureLabel == null ? null + sortByFeature( + featureLabel == null ? null : Arrays.asList(new String[] { featureLabel }), - groupLabel == null ? null - : Arrays.asList(new String[]{ groupLabel }), start, stop, alignment, method); + groupLabel == null ? null : Arrays + .asList(new String[] { groupLabel }), start, stop, + alignment, method); } private static boolean containsIgnoreCase(final String lab, @@ -747,8 +749,8 @@ public class AlignmentSorter } public static void sortByFeature(List featureLabels, - List groupLabels, int start, int stop, AlignmentI alignment, - String method) + List groupLabels, int start, int stop, + AlignmentI alignment, String method) { if (method != FEATURE_SCORE && method != FEATURE_LABEL && method != FEATURE_DENSITY)