X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fanalysis%2FAlignmentSorter.java;h=778142c24fed58fc045634860caf4029f5be35ee;hb=dd74fc4938723fe5ec48d4e5fdcfbe58ac42a48d;hp=24f2ddfa2f62f7596e5b33b2db4f3b8d6cd3cfe2;hpb=6c4bc68ae8b1c5005e79661bb2d8246515cb787d;p=jalview.git

diff --git a/src/jalview/analysis/AlignmentSorter.java b/src/jalview/analysis/AlignmentSorter.java
index 24f2ddf..778142c 100755
--- a/src/jalview/analysis/AlignmentSorter.java
+++ b/src/jalview/analysis/AlignmentSorter.java
@@ -198,7 +198,7 @@ public class AlignmentSorter
             {
                 SequenceGroup sg2 = (SequenceGroup) groups.elementAt(j);
 
-                if (sg.getSize(false) > sg2.getSize(false))
+                if (sg.getSize() > sg2.getSize())
                 {
                     groups.insertElementAt(sg, j);