X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fanalysis%2FCodingUtils.java;h=7fb0eb8b1f7dfea7130277e9a3d7dc3d8711c326;hb=032527014a1eafae4110666a53aad60992a29576;hp=34f861981dc4643fc585881bb68f1130776d17d5;hpb=db4eacee27b836db4126dca551887bfc6652d72a;p=jalview.git diff --git a/src/jalview/analysis/CodingUtils.java b/src/jalview/analysis/CodingUtils.java index 34f8619..7fb0eb8 100644 --- a/src/jalview/analysis/CodingUtils.java +++ b/src/jalview/analysis/CodingUtils.java @@ -109,6 +109,15 @@ public class CodingUtils return result; } + public static void decodeCodon2(int encoded, char[] result) + { + result[2] = decodeNucleotide(encoded & 3); + encoded = encoded >>> CODON_ENCODING_BITSHIFT; + result[1] = decodeNucleotide(encoded & 3); + encoded = encoded >>> CODON_ENCODING_BITSHIFT; + result[0] = decodeNucleotide(encoded & 3); + } + /** * Convert value 0/1/2/3 to 'A'/'C'/'G'/'T' *