X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fanalysis%2FCodingUtils.java;h=7fb0eb8b1f7dfea7130277e9a3d7dc3d8711c326;hb=270f61aee660a2b8206e51f6392405b8ac30fef7;hp=be47b022a68c037502142ac602d47fa0918fce5a;hpb=838e4f91d4a53dd315640dbc9ff6ef7a815ee576;p=jalview.git

diff --git a/src/jalview/analysis/CodingUtils.java b/src/jalview/analysis/CodingUtils.java
index be47b02..7fb0eb8 100644
--- a/src/jalview/analysis/CodingUtils.java
+++ b/src/jalview/analysis/CodingUtils.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9.0b1)
- * Copyright (C) 2015 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -109,6 +109,15 @@ public class CodingUtils
     return result;
   }
 
+  public static void decodeCodon2(int encoded, char[] result)
+  {
+    result[2] = decodeNucleotide(encoded & 3);
+    encoded = encoded >>> CODON_ENCODING_BITSHIFT;
+    result[1] = decodeNucleotide(encoded & 3);
+    encoded = encoded >>> CODON_ENCODING_BITSHIFT;
+    result[0] = decodeNucleotide(encoded & 3);
+  }
+
   /**
    * Convert value 0/1/2/3 to 'A'/'C'/'G'/'T'
    *