X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fanalysis%2FCodingUtils.java;h=92b39c38d55a27dfc8510ec6ad23319fc0f87615;hb=6c9f1f0278e44bdb3d777c0e4227c22fa09425bf;hp=91c14c06f21868999f94f79caa26fba09f6c0424;hpb=17e77c3f2949a0729322b4a8d907f3f34b6a9914;p=jalview.git

diff --git a/src/jalview/analysis/CodingUtils.java b/src/jalview/analysis/CodingUtils.java
index 91c14c0..92b39c3 100644
--- a/src/jalview/analysis/CodingUtils.java
+++ b/src/jalview/analysis/CodingUtils.java
@@ -1,6 +1,6 @@
 /*
- * Jalview - A Sequence Alignment Editor and Viewer (Version 2.9)
- * Copyright (C) 2015 The Jalview Authors
+ * Jalview - A Sequence Alignment Editor and Viewer ($$Version-Rel$$)
+ * Copyright (C) $$Year-Rel$$ The Jalview Authors
  * 
  * This file is part of Jalview.
  * 
@@ -109,6 +109,15 @@ public class CodingUtils
     return result;
   }
 
+  public static void decodeCodon2(int encoded, char[] result)
+  {
+   result[2] = decodeNucleotide(encoded & 3);
+    encoded = encoded >>> CODON_ENCODING_BITSHIFT;
+    result[1] = decodeNucleotide(encoded & 3);
+    encoded = encoded >>> CODON_ENCODING_BITSHIFT;
+    result[0] = decodeNucleotide(encoded & 3);
+  }
+
   /**
    * Convert value 0/1/2/3 to 'A'/'C'/'G'/'T'
    *