X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fanalysis%2FConservation.java;h=b9b68cec25198d3bf1a175cf0efb7e1d09818bff;hb=83b55697263efc7b0c660eba6ea7091f6904257d;hp=0bfb63658413f2b452e9e5add50db9fddec6d250;hpb=0410fb5d6f4c4e346daf4bb9ad0a78f2e04b4c93;p=jalview.git diff --git a/src/jalview/analysis/Conservation.java b/src/jalview/analysis/Conservation.java index 0bfb636..b9b68ce 100755 --- a/src/jalview/analysis/Conservation.java +++ b/src/jalview/analysis/Conservation.java @@ -123,7 +123,7 @@ public class Conservation for (j = 1; j <= len; j++) { - sqnum[j] = ((Integer) jalview.schemes.ResidueProperties.aaHash.get(Character.toString( + sqnum[j] = ((Integer) jalview.schemes.ResidueProperties.aaHash.get(String.valueOf( sq.charAt(j - 1)))).intValue(); // yuk - JBPNote - case taken care of in aaHash } @@ -163,7 +163,7 @@ public class Conservation if (sequence.length() > i) { - res = Character.toString(Character.toUpperCase(sequence.charAt(i))); + res = String.valueOf(Character.toUpperCase(sequence.charAt(i))); if (residueHash.containsKey(res)) {