X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fanalysis%2FFinder.java;fp=src%2Fjalview%2Fanalysis%2FFinder.java;h=0d8665ff373add02d627415bc470a70cdefd1961;hb=bc07c82cde95d498cf6919422baf7ad3994e1bf2;hp=5d42905ba40dad454a23b8c1e2ec0a4219cd6cd7;hpb=4016a0a5baf92cea3f1303fdaae3804244857427;p=jalview.git

diff --git a/src/jalview/analysis/Finder.java b/src/jalview/analysis/Finder.java
index 5d42905..0d8665f 100644
--- a/src/jalview/analysis/Finder.java
+++ b/src/jalview/analysis/Finder.java
@@ -164,14 +164,10 @@ public class Finder implements FinderI
     getSequence(ignoreHidden);
 
     boolean found = false;
-    while (!found || findAll)
+    while ((!found || findAll) && sequenceIndex < end)
     {
       found = findNextMatch(searchString, searchPattern, searchDescription,
               ignoreHidden);
-      if (sequenceIndex >= end)
-      {
-        break;
-      }
     }
   }