X-Git-Url: http://source.jalview.org/gitweb/?a=blobdiff_plain;f=src%2Fjalview%2Fanalysis%2FFinder.java;h=b25364263f2c922b645436cb53be185f07ef7785;hb=a6e32ecfbd6ba17bda3d58ebdbadaec7302073c0;hp=96151d743f0c4782a7d864581f0ec934de5c36df;hpb=47168f025aefdaa044802bd5f8f510ffe43a4808;p=jalview.git diff --git a/src/jalview/analysis/Finder.java b/src/jalview/analysis/Finder.java index 96151d7..b253642 100644 --- a/src/jalview/analysis/Finder.java +++ b/src/jalview/analysis/Finder.java @@ -20,9 +20,12 @@ */ package jalview.analysis; -import java.util.*; +import jalview.datamodel.AlignmentI; +import jalview.datamodel.SearchResults; +import jalview.datamodel.Sequence; +import jalview.datamodel.SequenceGroup; -import jalview.datamodel.*; +import java.util.Vector; public class Finder { @@ -146,6 +149,18 @@ public class Finder break; } } + + if (regex.search(seq.getDescription())) + { + idMatch.addElement(seq); + hasResults = true; + if (!findAll) + { + // stop and return the match + found = true; + break; + } + } } item = seq.getSequenceAsString();